RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 NEU3Q9UQ49 428 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 SIGLEC9Q9Y336 463 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 PDS5BQ9NTI5 1447 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 GRIN2BQ13224 1484 aa2.58□□□□□ -2
PTPRK-220ENST00000531466 DNMBPQ6XZF7 1577 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 A0A0X1KG70 313 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 A0A1B0GUS0 222 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 TINCRA0A1B0GVN0 87 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 NKX2-6A6NCS4 301 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 OR5H15A6NDH6 313 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 FAM74A7A6NL05 159 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 USP27XA6NNY8 438 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 FAM166BA8MTA8 275 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 ANKRD65E5RJM6 399 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 F6UZH7 168 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 I3L4J1 428 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 COPEO14579 308 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 SOX15O60248 233 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 FAM189A1O60320 539 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 RDH16O75452 317 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 ATP5LO75964 103 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 OAS1P00973 400 aaKnown RBP2.57□□□□□ -2
PTPRK-220ENST00000531466 DBIP07108 87 aaKnown RBP2.57□□□□□ -2
PTPRK-220ENST00000531466 TACSTD2P09758 323 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 TRAPPC2P0DI81 140 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 TRAPPC2BP0DI82 140 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 GZMHP20718 246 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 HRH1P35367 487 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 VHLP40337 213 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 NBL1P41271 181 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 RAB5CP51148 216 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 SGSHP51688 502 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 CLDN12P56749 244 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 TAS2R43P59537 309 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 RAB5BP61020 215 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 RRAS2P62070 204 aaPredicted RBP2.57□□□□□ -2
PTPRK-220ENST00000531466 RHOBP62745 196 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 RPL31P62899 125 aaKnown RBP2.57□□□□□ -2
PTPRK-220ENST00000531466 CD164Q04900 197 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 BAXQ07812 192 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 ST3GAL4Q11206 333 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 EBI3Q14213 229 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 SHHQ15465 462 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 GABRA6Q16445 453 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 CLEC12BQ2HXU8 276 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 SLC25A52Q3SY17 297 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 FAM74A3Q4VXF1 159 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 ACSBG2Q5FVE4 666 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 TFDP3Q5H9I0 405 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 OR10J3Q5JRS4 329 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 CLEC12AQ5QGZ9 265 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 C1orf220Q5T0J3 134 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 OTPQ5XKR4 325 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 HBMQ6B0K9 141 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 GLYATQ6IB77 296 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 TNFAIP8L2Q6P589 184 aaPredicted RBP2.57□□□□□ -2
PTPRK-220ENST00000531466 LEG1Q6P5S2 330 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 CASP12Q6UXS9 341 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 LANCL3Q6ZV70 420 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 ASCL5Q7RTU5 278 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 BAP18Q8IXM2 172 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 BLIDQ8IZY5 108 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 CA13Q8N1Q1 262 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 ARRDC1Q8N5I2 433 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 ZNF676Q8N7Q3 588 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 ARIH2OSQ8N7S6 290 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 ZNF557Q8N988 423 aaPredicted RBP2.57□□□□□ -2
PTPRK-220ENST00000531466 UBAC2Q8NBM4 344 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 TSTD1Q8NFU3 115 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 GPR32P1Q8NGA4 272 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 OR52E4Q8NGH9 312 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 OR4D11Q8NGI4 311 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 OR5J2Q8NH18 312 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 MCFD2Q8NI22 146 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 HAVCR2Q8TDQ0 301 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 AENQ8WTP8 325 aaKnown RBP2.57□□□□□ -2
PTPRK-220ENST00000531466 CANT1Q8WVQ1 401 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 ART4Q93070 314 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 ROPN1LQ96C74 230 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 SEH1LQ96EE3 360 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 AURKBQ96GD4 344 aaPredicted RBP2.57□□□□□ -2
PTPRK-220ENST00000531466 KCNA7Q96RP8 456 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 NIPSNAP3BQ9BS92 247 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 MAP1LC3AQ9H492 121 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 EFCAB1Q9HAE3 211 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 CACYBPQ9HB71 228 aaKnown RBP2.57□□□□□ -2
PTPRK-220ENST00000531466 AMBNQ9NP70 447 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 ENY2Q9NPA8 101 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 SLCO1B3Q9NPD5 702 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 SLC25A37Q9NYZ2 338 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 COMMD9Q9P000 198 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 ZFP30Q9Y2G7 519 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 RCL1Q9Y2P8 373 aaKnown RBP2.57□□□□□ -2
PTPRK-220ENST00000531466 RTL1A6NKG5 1358 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 DAPK1P53355 1430 aa2.57□□□□□ -2
PTPRK-220ENST00000531466 A0A096LPI6 279 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 DAPL1A0PJW8 107 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 ISPDA4D126 451 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 FAM159BA6NKW6 160 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms