RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 DLX4Q92988 240 aaPredicted RBP6.33□□□□□ -1.4
CD44-232ENST00000531118 RPEQ96AT9 228 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 SNX22Q96L94 193 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 C7orf26Q96N11 449 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 OR5B12Q96R08 314 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 SH3GL1Q99961 368 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 ABHD6Q9BV23 337 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 ST6GALNAC5Q9BVH7 336 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 CHST6Q9GZX3 395 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 GAL3ST2Q9H3Q3 398 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 PCDHB16Q9NRJ7 776 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 ENPP4Q9Y6X5 453 aa6.33□□□□□ -1.4
CD44-232ENST00000531118 C12orf77C9JDV5 145 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 IDH3BO43837 385 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 IGKV1D-33P01593 117 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 IGKV1-33P01594 117 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 GYPBP06028 91 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 MPZP25189 248 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 FMO3P31513 532 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 KIR3DL2P43630 455 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 ISL1P61371 349 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 CYLC2Q14093 348 aaPredicted RBP6.32□□□□□ -1.4
CD44-232ENST00000531118 HNF4GQ14541 408 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 GRK1Q15835 563 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 HEPN1Q6WQI6 88 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 SLC37A3Q8NCC5 494 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 OR2T12Q8NG77 320 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 OR6K6Q8NGW6 343 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 TSPEARQ8WU66 669 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 NABP2Q9BQ15 211 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 ABCG5Q9H222 651 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 HIPK2Q9H2X6 1198 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 NIPAL2Q9H841 368 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 LIN7CQ9NUP9 197 aaKnown RBP6.32□□□□□ -1.4
CD44-232ENST00000531118 INTS9Q9NV88 658 aaKnown RBP6.32□□□□□ -1.4
CD44-232ENST00000531118 FBXL7Q9UJT9 491 aa6.32□□□□□ -1.4
CD44-232ENST00000531118 UBE2J1Q9Y385 318 aaPredicted RBP6.32□□□□□ -1.4
CD44-232ENST00000531118 MAGEA13PA6NCF6 341 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 NUPR2A6NF83 97 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 TOR1AO14656 332 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 H2BFMP0C1H6 154 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 SPI1P17947 270 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 PEX2P28328 305 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 P2RX3P56373 397 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 PITPNAQ00169 270 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 PMS2P11Q13670 270 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 KIAA0141Q14154 515 aaPredicted RBP6.31□□□□□ -1.4
CD44-232ENST00000531118 UTF1Q5T230 341 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 ZNF684Q5T5D7 378 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 FAM53AQ6NSI3 398 aaPredicted RBP6.31□□□□□ -1.4
CD44-232ENST00000531118 TRPM8Q7Z2W7 1104 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 ZNF573Q86YE8 665 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 TGIF2LXQ8IUE1 241 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 ERI1Q8IV48 349 aaKnown RBP6.31□□□□□ -1.4
CD44-232ENST00000531118 ZNF491Q8N8L2 437 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 OR52N4Q8NGI2 321 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 UBE2E2Q96LR5 201 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 KCTD7Q96MP8 289 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 HSPB9Q9BQS6 159 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 FUZQ9BT04 418 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 KRTAP4-5Q9BYR2 181 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 ALX4Q9H161 411 aaPredicted RBP6.31□□□□□ -1.4
CD44-232ENST00000531118 GHITMQ9H3K2 345 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 DCAF13Q9NV06 445 aaKnown RBP6.31□□□□□ -1.4
CD44-232ENST00000531118 ACTR3BQ9P1U1 418 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 VSIG4Q9Y279 399 aa6.31□□□□□ -1.4
CD44-232ENST00000531118 AMMECR1Q9Y4X0 333 aaPredicted RBP6.31□□□□□ -1.4
CD44-232ENST00000531118 A0A087X0M5 115 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 TRGV10A0A0A0MS01 117 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 A0A1B0GX30 115 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 PQLC2LA1A4F0 135 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 CXorf65A6NEN9 183 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 LINC01619G3V211 115 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 BRI3O95415 125 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 HAND1O96004 215 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 IGLV1-51P01701 117 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 CLUP10909 449 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 H2AFXP16104 143 aaPredicted RBP6.3□□□□□ -1.4
CD44-232ENST00000531118 GABRR1P24046 479 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 OR3A1P47881 315 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 ZNF91Q05481 1191 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 CRMP1Q14194 572 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 DIAPH2-AS1Q14236 149 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 HSP90B2PQ58FF3 399 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 LINC01590Q5TEZ4 76 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 LCN1P1Q5VSP4 162 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 FKBP9P1Q75LS8 142 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 COMMD2Q86X83 199 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 IZUMO1Q8IYV9 350 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 PGAM4Q8N0Y7 254 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 Q8N6K4 173 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 RNF148Q8N7C7 305 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 Q8N9W7 124 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 OR52L1Q8NGH7 329 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 OR52J3Q8NH60 311 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 ITFG2Q969R8 447 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 OR4C12Q96R67 309 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 INTS14Q96SY0 518 aa6.3□□□□□ -1.4
CD44-232ENST00000531118 SIKE1Q9BRV8 207 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms