RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 TRBV23-1A0A0A0MS06 115 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 C22orf46C9J442 243 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 INAFM1C9JVW0 142 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 DEGS1O15121 323 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 ZNF737O75373 536 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 FCN3O75636 299 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 TK1P04183 234 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 CALCBP10092 127 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 SELLP14151 372 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 NDUFB7P17568 137 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 HNF1AP20823 631 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 HTR2CP28335 458 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 DUSP1P28562 367 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 CEBPDP49716 269 aaPredicted RBP12.66□□□□□ -0.38
CCS-206ENST00000530961 FAM120AOSQ5T036 256 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 C22orf42Q6IC83 251 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 OSR2Q8N2R0 312 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 ASCC1Q8N9N2 400 aaKnown RBP12.66□□□□□ -0.38
CCS-206ENST00000530961 OR6M1Q8NGM8 313 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 OR10K1Q8NGX5 313 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 C8orf46Q8TAG6 207 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 DCTN5Q9BTE1 182 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 SHARPINQ9H0F6 387 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 TXNL4BQ9NX01 149 aaKnown RBP12.66□□□□□ -0.38
CCS-206ENST00000530961 METRNQ9UJH8 293 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 CDC42EP3Q9UKI2 254 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 AK6Q9Y3D8 172 aaKnown RBP12.66□□□□□ -0.38
CCS-206ENST00000530961 V9GY05 133 aa12.66□□□□□ -0.38
CCS-206ENST00000530961 SLC22A1O15245 554 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 OR2H2O95918 312 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 SMIM18P0DKX4 95 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 PPIAL4GP0DN37 164 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 SERPINA2P20848 420 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 SNU13P55769 128 aaKnown RBP12.65□□□□□ -0.38
CCS-206ENST00000530961 LINC00596Q86U02 117 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 OR8H2Q8N162 312 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 LY6G5BQ8NDX9 201 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 H1FXQ92522 213 aaKnown RBP12.65□□□□□ -0.38
CCS-206ENST00000530961 KCTD7Q96MP8 289 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 MRI1Q9BV20 369 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 BEX2Q9BXY8 128 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 TMPRSS13Q9BYE2 586 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 MRPS26Q9BYN8 205 aaKnown RBP12.65□□□□□ -0.38
CCS-206ENST00000530961 CST11Q9H112 138 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 OR51E2Q9H255 320 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 ST3GAL6Q9Y274 331 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 AUP1Q9Y679 476 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 TLN2Q9Y4G6 2542 aa12.65□□□□□ -0.38
CCS-206ENST00000530961 DYSFO75923 2080 aa12.65□□□□□ -0.39
CCS-206ENST00000530961 TMEM82A0PJX8 343 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 H3BUI4 141 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 SLC17A2O00624 439 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 ZNF44P15621 663 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 GABRR1P24046 479 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 GADD45AP24522 165 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 RBM11P57052 281 aaKnown RBP12.64□□□□□ -0.39
CCS-206ENST00000530961 MPV17LQ2QL34 196 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 CHRFAM7AQ494W8 412 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 Q6P435 159 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 C17orf107Q6ZR85 190 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 TPRA1Q86W33 373 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 YIPF6Q96EC8 236 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 C1orf147Q96MC9 270 aaPredicted RBP12.64□□□□□ -0.39
CCS-206ENST00000530961 CHCHD6Q9BRQ6 235 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 IFT22Q9H7X7 185 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 PLGRKTQ9HBL7 147 aa12.64□□□□□ -0.39
CCS-206ENST00000530961 A0A0G2JK05 382 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 A0A1W2PPH5 198 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 SIRPB1O00241 398 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 MGST3O14880 152 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 PSPNO60542 156 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 CRLF1O75462 422 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 BPNT1O95861 308 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 RAB3BP20337 219 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 CFPP27918 469 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 RPL31P62899 125 aaKnown RBP12.63□□□□□ -0.39
CCS-206ENST00000530961 SCN1BQ07699 218 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 GRK1Q15835 563 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 RAB11BQ15907 218 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 PIGYQ3MUY2 71 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 GDPD3Q7L5L3 318 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 FGFRL1Q8N441 504 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 KCNG3Q8TAE7 436 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 GFI1Q99684 422 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 OPN4Q9UHM6 478 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 KPTNQ9Y664 436 aa12.63□□□□□ -0.39
CCS-206ENST00000530961 LOC100506127A0A0U1RQW1 187 aa12.62□□□□□ -0.39
CCS-206ENST00000530961 SHISA3A0PJX4 238 aa12.62□□□□□ -0.39
CCS-206ENST00000530961 FUOMA2VDF0 154 aa12.62□□□□□ -0.39
CCS-206ENST00000530961 FAM90A10PA6NDY2 464 aa12.62□□□□□ -0.39
CCS-206ENST00000530961 FAM90A18PA6NE21 464 aa12.62□□□□□ -0.39
CCS-206ENST00000530961 FAM90A16PA6NEW6 464 aa12.62□□□□□ -0.39
CCS-206ENST00000530961 FAM90A20PA6NIJ5 464 aa12.62□□□□□ -0.39
CCS-206ENST00000530961 FAM90A8PA6NJQ4 464 aa12.62□□□□□ -0.39
CCS-206ENST00000530961 FAM90A7PA6NKC0 464 aa12.62□□□□□ -0.39
CCS-206ENST00000530961 FAM90A22PA8MWA6 464 aa12.62□□□□□ -0.39
CCS-206ENST00000530961 FAM90A12PA8MX19 464 aa12.62□□□□□ -0.39
CCS-206ENST00000530961 FAM90A5PA8MXJ8 464 aa12.62□□□□□ -0.39
CCS-206ENST00000530961 FAM90A23PA8MXZ1 464 aa12.62□□□□□ -0.39
CCS-206ENST00000530961 SLC33A1O00400 549 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms