RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 MEGF8Q7Z7M0 2845 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 ODF3BA8MYP8 253 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 M0QZ24 198 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 TIMM23O14925 209 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 WBP4O75554 376 aaKnown RBP10.8□□□□□ -0.68
VPS28-211ENST00000530790 ALX3O95076 343 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 OR2H2O95918 312 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 LIMS3P0CW19 117 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 LIMS4P0CW20 117 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 TMEM225BP0DP42 221 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 ZNF44P15621 663 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 MYL12AP19105 171 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 PAX6P26367 422 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 GABRA5P31644 462 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 P2RX3P56373 397 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 DYNC1I2Q13409 638 aaKnown RBP10.8□□□□□ -0.68
VPS28-211ENST00000530790 KISS1Q15726 138 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 LRRC36Q1X8D7 754 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 ZNF626Q68DY1 528 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 TMPRSS11AQ6ZMR5 421 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 LIAT1Q6ZQX7 453 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 PACRGLQ8N7B6 248 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 SETD9Q8NE22 299 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 OR11H6Q8NGC7 330 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 OR4C13Q8NGP0 309 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 CNIH3Q8TBE1 160 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 SESN1Q9Y6P5 492 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 PKD1L1Q8TDX9 2849 aa10.8□□□□□ -0.68
VPS28-211ENST00000530790 TRGV10A0A0A0MS01 117 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 FUOMA2VDF0 154 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 FAM90A8PA6NJQ4 464 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 VGLL3A8MV65 326 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 MAGEB3O15480 346 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 CLIC3O95833 236 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 CD2P06729 351 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 RAB3AP20336 220 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 DCKP27707 260 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 ERP29P30040 261 aaKnown RBP10.79□□□□□ -0.68
VPS28-211ENST00000530790 SOX2P48431 317 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 ETV1P50549 477 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 GTF2A1P52655 376 aaPredicted RBP10.79□□□□□ -0.68
VPS28-211ENST00000530790 KRTAP10-3P60369 221 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 IL18R1Q13478 541 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 CDK5R1Q15078 307 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 RCN1Q15293 331 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 CCDC58Q4VC31 144 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 PLA1AQ53H76 456 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 TTC23Q5W5X9 447 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 RPL22L1Q6P5R6 122 aaKnown RBP10.79□□□□□ -0.68
VPS28-211ENST00000530790 RNF144BQ7Z419 303 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 CHST4Q8NCG5 386 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 GPR148Q8TDV2 347 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 GAL3ST2Q9H3Q3 398 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 RANBP3Q9H6Z4 567 aaPredicted RBP10.79□□□□□ -0.68
VPS28-211ENST00000530790 TCF7L1Q9HCS4 588 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 ABCB10Q9NRK6 738 aa10.79□□□□□ -0.68
VPS28-211ENST00000530790 UBE2J1Q9Y385 318 aaPredicted RBP10.79□□□□□ -0.68
VPS28-211ENST00000530790 IGHV2-26A0A0B4J1V2 119 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 MTNR1BP49286 362 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 ZP1P60852 638 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 SCN1BQ07699 218 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 MED21Q13503 144 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 FAM189A2Q15884 450 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 OR2G6Q5TZ20 316 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 XAF1Q6GPH4 301 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 ASPHD2Q6ICH7 369 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 SLC35E4Q6ICL7 350 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 CRIP3Q6Q6R5 217 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 NDNFQ8TB73 568 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 RPS4Y2Q8TD47 263 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 RGP1Q92546 391 aaPredicted RBP10.78□□□□□ -0.68
VPS28-211ENST00000530790 TMEM106AQ96A25 262 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 MALSU1Q96EH3 234 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 GPER1Q99527 375 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 CLEC7AQ9BXN2 247 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 NPFFR1Q9GZQ6 430 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 FAM192AQ9GZU8 254 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 TMEM133Q9H2Q1 129 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 TAS2R4Q9NYW5 299 aa10.78□□□□□ -0.68
VPS28-211ENST00000530790 DIMT1Q9UNQ2 313 aaKnown RBP10.78□□□□□ -0.68
VPS28-211ENST00000530790 EXOSC1Q9Y3B2 195 aaKnown RBP10.78□□□□□ -0.68
VPS28-211ENST00000530790 SLC33A1O00400 549 aaPredicted RBP10.77□□□□□ -0.69
VPS28-211ENST00000530790 GABRPO00591 440 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 CHST1O43916 411 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 CSN2P05814 226 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 LMO1P25800 156 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 PPP3R1P63098 170 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 SSX2Q16385 188 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 MINOS1Q5TGZ0 78 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 PRAMEF5Q5TYX0 476 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 C11orf88Q6PI97 169 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 SATL1Q86VE3 508 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 DYNAPQ8N1N2 210 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 DHRSXQ8N5I4 330 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 PXT1Q8NFP0 134 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 OR2T6Q8NHC8 308 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 TNFAIP8L1Q8WVP5 186 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 SMIM19Q96E16 107 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 MMP27Q9H306 513 aa10.77□□□□□ -0.69
VPS28-211ENST00000530790 CHCHD3Q9NX63 227 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms