RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CARTPTQ16568 116 aa12.18□□□□□ -0.46
TTC39A-216ENST00000530004 PRAMEF6Q5VXH4 476 aa12.18□□□□□ -0.46
TTC39A-216ENST00000530004 BRICD5Q6PL45 260 aa12.18□□□□□ -0.46
TTC39A-216ENST00000530004 FAM58AQ8N1B3 248 aa12.18□□□□□ -0.46
TTC39A-216ENST00000530004 SNAPC3Q92966 411 aa12.18□□□□□ -0.46
TTC39A-216ENST00000530004 OCSTAMPQ9BR26 566 aa12.18□□□□□ -0.46
TTC39A-216ENST00000530004 TINAGL1Q9GZM7 467 aaPredicted RBP12.18□□□□□ -0.46
TTC39A-216ENST00000530004 UBTD1Q9HAC8 227 aa12.18□□□□□ -0.46
TTC39A-216ENST00000530004 RHOFQ9HBH0 211 aa12.18□□□□□ -0.46
TTC39A-216ENST00000530004 AK3Q9UIJ7 227 aa12.18□□□□□ -0.46
TTC39A-216ENST00000530004 ANAPC10Q9UM13 185 aa12.18□□□□□ -0.46
TTC39A-216ENST00000530004 A0A0B4J293 547 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 A6NLC8 198 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 C3orf80F5H4A9 247 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 CD74P04233 296 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 DANCRP0C864 163 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 PGA5P0DJD9 388 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 FUT3P21217 361 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 DUSP1P28562 367 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 IKZF1Q13422 519 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 TATDN3Q17R31 274 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 MPV17LQ2QL34 196 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 MST1LQ2TV78 715 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 ATAD3CQ5T2N8 411 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 BTN2A1Q7KYR7 527 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 Q8IYB0 196 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 TLNRD1Q9H1K6 362 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 C20orf85Q9H1P6 137 aa12.17□□□□□ -0.46
TTC39A-216ENST00000530004 B9A039 149 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 NAT1P18440 290 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 GMFBP60983 142 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 MRPS15P82914 257 aaKnown RBP12.16□□□□□ -0.46
TTC39A-216ENST00000530004 IL13RA2Q14627 380 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 MPPED2Q15777 294 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 SWI5Q1ZZU3 235 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 RNASE10Q5GAN6 216 aaKnown RBP12.16□□□□□ -0.46
TTC39A-216ENST00000530004 ZNF826PQ6ZT77 177 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 LINC00596Q86U02 117 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 C11orf53Q8IXP5 236 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 OR51S1Q8NGJ8 323 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 DYRK2Q92630 601 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 ELMOD3Q96FG2 381 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 CMSS1Q9BQ75 279 aaKnown RBP12.16□□□□□ -0.46
TTC39A-216ENST00000530004 NRIP2Q9BQI9 281 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 HDHD3Q9BSH5 251 aaPredicted RBP12.16□□□□□ -0.46
TTC39A-216ENST00000530004 ST6GALNAC5Q9BVH7 336 aa12.16□□□□□ -0.46
TTC39A-216ENST00000530004 ZNF230Q9UIE0 474 aaPredicted RBP12.16□□□□□ -0.46
TTC39A-216ENST00000530004 UBE2QL1A1L167 161 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 SPRY3O43610 288 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 NXPH2O95156 264 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 AMY2AP04746 511 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 CSN2P05814 226 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 SOD3P08294 240 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 H2AFB2P0C5Z0 115 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 HRH1P35367 487 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 CD200P41217 278 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 ERVK11-1P61568 191 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 BTG1P62324 171 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 MEF2DQ14814 521 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 NKPD1Q17RQ9 610 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 AGAP6Q5VW22 663 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 DTX2Q86UW9 622 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 HOGA1Q86XE5 327 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 POC1AQ8NBT0 407 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 OR4K15Q8NH41 348 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 MAFIPQ8WZ33 124 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 CBLN4Q9NTU7 201 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 UFSP2Q9NUQ7 469 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 ZNF701Q9NV72 531 aaPredicted RBP12.15□□□□□ -0.46
TTC39A-216ENST00000530004 RCC2Q9P258 522 aaKnown RBP12.15□□□□□ -0.46
TTC39A-216ENST00000530004 PLEKHA6Q9Y2H5 1048 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 NDUFB6O95139 128 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 ACAA1P09110 424 aaPredicted RBP12.15□□□□□ -0.46
TTC39A-216ENST00000530004 ZNF735P0CB33 412 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 AMY2BP19961 511 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 TBPP20226 339 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 ZNF81P51508 661 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 RBMS2Q15434 407 aaKnown RBP12.15□□□□□ -0.46
TTC39A-216ENST00000530004 WDR82Q6UXN9 313 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 BPIFB2Q8N4F0 458 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 BEST4Q8NFU0 473 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 FLVCR2Q9UPI3 526 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 ALG5Q9Y673 324 aa12.15□□□□□ -0.46
TTC39A-216ENST00000530004 PTPN13Q12923 2485 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 hCG_1807616A0A1W2PRN6 198 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 DISC1C4P0D8 188 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 M0R233 179 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 NOS1APO75052 506 aaPredicted RBP12.14□□□□□ -0.47
TTC39A-216ENST00000530004 DHFRP00374 187 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 CD8AP01732 235 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 PMP2P02689 132 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 PMELP40967 661 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 MICBQ29980 383 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 ACTBL2Q562R1 376 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 C11orf71Q6IPW1 123 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 C20orf204Q6ZNR8 217 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 OR2V2Q96R30 315 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 SLC6A7Q99884 636 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 NEURL2Q9BR09 285 aa12.14□□□□□ -0.47
TTC39A-216ENST00000530004 GINS4Q9BRT9 223 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms