RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 SIRT7Q9NRC8 400 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 FOXJ3Q9UPW0 622 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 GSTK1Q9Y2Q3 226 aa13.22□□□□□ -0.29
TSPAN4-218ENST00000529566 SH2D1BO14796 132 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 SC5DO75845 299 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 OR2H2O95918 312 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 PRTN3P24158 256 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 ZNF93P35789 620 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 OR3A1P47881 315 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 MTNR1BP49286 362 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 ZNF273Q14593 569 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 ACSM3Q53FZ2 586 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 HCP5Q6MZN7 132 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 TCF23Q7RTU1 214 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 PIP4P2Q8N4L2 257 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 MS4A15Q8N5U1 240 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 OR4S1Q8NGB4 309 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 OR51T1Q8NGJ9 327 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 OR5D13Q8NGL4 314 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 TBC1D15Q8TC07 691 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 ZFAND2BQ8WV99 257 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 GPER1Q99527 375 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 C19orf24Q9BVV8 132 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 PPIL3Q9H2H8 161 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 METTL8Q9H825 291 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 ISYNA1Q9NPH2 558 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 CKLFQ9UBR5 152 aa13.21□□□□□ -0.29
TSPAN4-218ENST00000529566 A0A0G2JK05 382 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 MDFIC2A0A1B0GVS7 189 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 CDRT1O95170 752 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 GABRR1P24046 479 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 DEFB112Q30KQ8 113 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 LIPKQ5VXJ0 399 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 PDZD9Q8IXQ8 264 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 JMJD8Q96S16 334 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 TMED9Q9BVK6 235 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 CCDC90BQ9GZT6 254 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 CHST6Q9GZX3 395 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 EXOSC4Q9NPD3 245 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 IL36GQ9NZH8 169 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 GLS2Q9UI32 602 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 DSCAML1Q8TD84 2053 aa13.2□□□□□ -0.3
TSPAN4-218ENST00000529566 SIRPB1O00241 398 aa13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 SLC33A1O00400 549 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 CCL3L1P16619 93 aa13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 BMXP51813 675 aa13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 ERVFRD-1P60508 538 aa13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 MEF2CQ06413 473 aaPredicted RBP13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 KLRD1Q13241 179 aa13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 GRK1Q15835 563 aa13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 FAM27D1Q5T7N8 215 aa13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 GDPD3Q7L5L3 318 aa13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 CDH26Q8IXH8 852 aa13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 OR10K1Q8NGX5 313 aa13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 THRSPQ92748 146 aa13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 BLOC1S6Q9UL45 172 aa13.19□□□□□ -0.3
TSPAN4-218ENST00000529566 DNAJC9-AS1A6NH13 148 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 C17orf98A8MV24 154 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 MGST3O14880 152 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 MAS1P04201 325 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 HSMCR30P0CW71 290 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 CPEP16870 476 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 MAPK3P27361 379 aaPredicted RBP13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 ERP29P30040 261 aaKnown RBP13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 UBE2E1P51965 193 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 EDDM3BP56851 147 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 GABARAPL2P60520 117 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 UBA52P62987 128 aaKnown RBP13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 MLLT11Q13015 90 aaPredicted RBP13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 BLMHQ13867 455 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 RSU1Q15404 277 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 TBCEQ15813 527 aaPredicted RBP13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 PIGYQ3MUY2 71 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 NHLRC3Q5JS37 347 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 RBMS3Q6XE24 437 aaKnown RBP13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 TMEM91Q6ZNR0 172 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 LRRTM1Q86UE6 522 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 PNKDQ8N490 385 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 TPRX1Q8N7U7 411 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 CHST4Q8NCG5 386 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 SPATA3Q8NHX4 192 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 FAM216AQ8WUB2 273 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 UFD1Q92890 307 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 AJUBAQ96IF1 538 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 MGLLQ99685 303 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 FAM192AQ9GZU8 254 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 METTL9Q9H1A3 318 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 Q9H521 79 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 ACOT13Q9NPJ3 140 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 ZNF581Q9P0T4 197 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 ING4Q9UNL4 249 aa13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 SF3B6Q9Y3B4 125 aaKnown RBP13.18□□□□□ -0.3
TSPAN4-218ENST00000529566 STAB1Q9NY15 2570 aa13.17□□□□□ -0.3
TSPAN4-218ENST00000529566 TRAV24A0A0B4J272 114 aa13.17□□□□□ -0.3
TSPAN4-218ENST00000529566 A0A0U1RQK1 487 aa13.17□□□□□ -0.3
TSPAN4-218ENST00000529566 A0A1W2PPH5 198 aa13.17□□□□□ -0.3
TSPAN4-218ENST00000529566 MEX3AA1L020 520 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-218ENST00000529566 CLDN34H7C241 214 aa13.17□□□□□ -0.3
TSPAN4-218ENST00000529566 DEGS1O15121 323 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms