RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 GUCA2AQ02747 115 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 SLC9A3R2Q15599 337 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 HCP5Q6MZN7 132 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 Q6P435 159 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 Q6YL49 198 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 GDPD3Q7L5L3 318 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 OR4S1Q8NGB4 309 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 GPER1Q99527 375 aa13.78□□□□□ -0.2
HIF3A-211ENST00000528563 A0A1W2PPH5 198 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 A0A1W2PPK0 400 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 PIN1P1O15428 100 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 OR2H2O95918 312 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 GABRR1P24046 479 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 MTNR1BP49286 362 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 UBE2E1P51965 193 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 SNU13P55769 128 aaKnown RBP13.77□□□□□ -0.21
HIF3A-211ENST00000528563 MEF2CQ06413 473 aaPredicted RBP13.77□□□□□ -0.21
HIF3A-211ENST00000528563 ZNF273Q14593 569 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 NCR3LG1Q68D85 454 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 UNQ9370/PRO34162Q6UXP9 181 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 TNFAIP8L1Q8WVP5 186 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 ZDHHC16Q969W1 377 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 CNBD2Q96M20 576 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 DUX5Q96PT3 197 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 DERL3Q96Q80 235 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 EXOSC4Q9NPD3 245 aaKnown RBP13.77□□□□□ -0.21
HIF3A-211ENST00000528563 DSCAML1Q8TD84 2053 aa13.77□□□□□ -0.21
HIF3A-211ENST00000528563 A0A0G2JK05 382 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 A0A0U1RQK1 487 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 C17orf98A8MV24 154 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 MGST3O14880 152 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 RGS10O43665 173 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 CCL3L1P16619 93 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 FSTP19883 344 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 ZNF93P35789 620 aaPredicted RBP13.76□□□□□ -0.21
HIF3A-211ENST00000528563 OR3A1P47881 315 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 BMXP51813 675 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 EDDM3BP56851 147 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 ERVFRD-1P60508 538 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 KLRD1Q13241 179 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 GPR50Q13585 617 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 GRK1Q15835 563 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 DDI2Q5TDH0 399 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 MS4A15Q8N5U1 240 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 OR51T1Q8NGJ9 327 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 NKX3-1Q99801 234 aaPredicted RBP13.76□□□□□ -0.21
HIF3A-211ENST00000528563 CHST6Q9GZX3 395 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 ZMAT3Q9HA38 289 aaKnown RBP13.76□□□□□ -0.21
HIF3A-211ENST00000528563 CKLFQ9UBR5 152 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 FOXJ3Q9UPW0 622 aa13.76□□□□□ -0.21
HIF3A-211ENST00000528563 MAGEA13PA6NCF6 341 aa13.75□□□□□ -0.21
HIF3A-211ENST00000528563 SIRPB1O00241 398 aa13.75□□□□□ -0.21
HIF3A-211ENST00000528563 NPFFO15130 113 aa13.75□□□□□ -0.21
HIF3A-211ENST00000528563 HOXA3O43365 443 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-211ENST00000528563 RNASE1P07998 156 aaKnown RBP13.75□□□□□ -0.21
HIF3A-211ENST00000528563 ZNF728P0DKX0 622 aa13.75□□□□□ -0.21
HIF3A-211ENST00000528563 EEF1B2P24534 225 aaKnown RBP13.75□□□□□ -0.21
HIF3A-211ENST00000528563 ERP29P30040 261 aaKnown RBP13.75□□□□□ -0.21
HIF3A-211ENST00000528563 OR3A4PP47883 348 aa13.75□□□□□ -0.21
HIF3A-211ENST00000528563 SCN1BQ07699 218 aa13.75□□□□□ -0.21
HIF3A-211ENST00000528563 RSU1Q15404 277 aa13.75□□□□□ -0.21
HIF3A-211ENST00000528563 MED22Q15528 200 aa13.75□□□□□ -0.21
HIF3A-211ENST00000528563 RBM48Q5RL73 367 aaKnown RBP13.75□□□□□ -0.21
HIF3A-211ENST00000528563 PRSS48Q7RTY5 328 aa13.75□□□□□ -0.21
HIF3A-211ENST00000528563 CHST4Q8NCG5 386 aa13.75□□□□□ -0.21
HIF3A-211ENST00000528563 SLC25A28Q96A46 364 aa13.75□□□□□ -0.21
HIF3A-211ENST00000528563 ZNF184Q99676 751 aaPredicted RBP13.75□□□□□ -0.21
HIF3A-211ENST00000528563 HEXA-AS1Q9H8Q6 139 aa13.75□□□□□ -0.21
HIF3A-211ENST00000528563 IL36GQ9NZH8 169 aa13.75□□□□□ -0.21
HIF3A-211ENST00000528563 SF3B6Q9Y3B4 125 aaKnown RBP13.75□□□□□ -0.21
HIF3A-211ENST00000528563 hCG_1809904A0A1W2PP81 198 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 A0A1W2PPE2 198 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 A0A1W2PR64 198 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 A0A1W2PRV1 198 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 TMEM89A2RUT3 159 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 DEGS1O15121 323 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 CDRT1O95170 752 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 MELTFP08582 738 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 TCF23Q7RTU1 214 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 LYPD6Q86Y78 171 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 CDH26Q8IXH8 852 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 PNKDQ8N490 385 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 OR10K1Q8NGX5 313 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 PPP1R35Q8TAP8 253 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 THRSPQ92748 146 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 ING4Q9UNL4 249 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 DNHD1Q96M86 4753 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 A0A1W2PRD5 423 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 A0A1W2PRF3 423 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 A0A1W2PRM7 423 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 hADV38S2A0JD32 116 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 MEX3AA1L020 520 aaKnown RBP13.74□□□□□ -0.21
HIF3A-211ENST00000528563 SLC33A1O00400 549 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-211ENST00000528563 RBP4P02753 201 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 ZNF44P15621 663 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 GP2P55259 537 aaKnown RBP13.74□□□□□ -0.21
HIF3A-211ENST00000528563 P2RX3P56373 397 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 TPBGQ13641 420 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 EDDM3AQ14507 147 aa13.74□□□□□ -0.21
HIF3A-211ENST00000528563 INSL4Q14641 139 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms