RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 GUCA2AQ02747 115 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 ACSM1Q08AH1 577 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 ST3GAL4Q11206 333 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 EDDM3AQ14507 147 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 MIDNQ504T8 468 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 TTC23Q5W5X9 447 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 NCR3LG1Q68D85 454 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 RPL22L1Q6P5R6 122 aaKnown RBP8.63□□□□□ -1.03
CD44-227ENST00000528086 CCBE1Q6UXH8 406 aaPredicted RBP8.63□□□□□ -1.03
CD44-227ENST00000528086 LYPD6Q86Y78 171 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 SERPINA12Q8IW75 414 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 SAXO1Q8IYX7 474 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 ZSCAN4Q8NAM6 433 aaPredicted RBP8.63□□□□□ -1.03
CD44-227ENST00000528086 OR5D13Q8NGL4 314 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 DYRK2Q92630 601 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 PAK1IP1Q9NWT1 392 aaPredicted RBP8.63□□□□□ -1.03
CD44-227ENST00000528086 BABAM2Q9NXR7 383 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 GSTK1Q9Y2Q3 226 aa8.63□□□□□ -1.03
CD44-227ENST00000528086 TRAV8-7A0A075B6U6 113 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 TRBV5-7A0A0A0MS05 114 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 TRAV24A0A0B4J272 114 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 SLC33A1O00400 549 aaPredicted RBP8.62□□□□□ -1.03
CD44-227ENST00000528086 CCDC159P0C7I6 412 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 IGHV1-8P0DP01 117 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 IGFBP3P17936 291 aaPredicted RBP8.62□□□□□ -1.03
CD44-227ENST00000528086 GLIPR1P48060 266 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 GP2P55259 537 aaKnown RBP8.62□□□□□ -1.03
CD44-227ENST00000528086 EDDM3BP56851 147 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 MEF2CQ06413 473 aaPredicted RBP8.62□□□□□ -1.03
CD44-227ENST00000528086 MRPL28Q13084 256 aaKnown RBP8.62□□□□□ -1.03
CD44-227ENST00000528086 GRK1Q15835 563 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 CCDC58Q4VC31 144 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 ZNF626Q68DY1 528 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 HIST2H2BDQ6DRA6 164 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 ELP2Q6IA86 826 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 Q8IYB0 196 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 OR11H6Q8NGC7 330 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 OR52N1Q8NH53 320 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 TBC1D15Q8TC07 691 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 GHSRQ92847 366 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 SMIM19Q96E16 107 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 SLITRK2Q9H156 845 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 PPIL3Q9H2H8 161 aaKnown RBP8.62□□□□□ -1.03
CD44-227ENST00000528086 C8orf4Q9NR00 106 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 PLCXD1Q9NUJ7 323 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 VPREB3Q9UKI3 123 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 SIGLEC9Q9Y336 463 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 EXOSC1Q9Y3B2 195 aaKnown RBP8.62□□□□□ -1.03
CD44-227ENST00000528086 SF3B6Q9Y3B4 125 aaKnown RBP8.62□□□□□ -1.03
CD44-227ENST00000528086 PCDHGB5Q9Y5G0 923 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 HSPE1-MOB4S4R3N1 261 aa8.62□□□□□ -1.03
CD44-227ENST00000528086 A0A1W2PP11 408 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 CLPSL1A2RUU4 121 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 POM121CA8CG34 1229 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 H3BUX3 64 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 TSPAN9O75954 239 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 RBP4P02753 201 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 GABRR1P24046 479 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 EEF1B2P24534 225 aaKnown RBP8.61□□□□□ -1.03
CD44-227ENST00000528086 ERP29P30040 261 aaKnown RBP8.61□□□□□ -1.03
CD44-227ENST00000528086 OR3A4PP47883 348 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 RAB13P51153 203 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 AQP4P55087 323 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 P2RX3P56373 397 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 AESQ08117 197 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 INSL4Q14641 139 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 C17orf58Q2M2W7 97 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 PIGYQ3MUY2 71 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 SPIN3Q5JUX0 258 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 PRR31Q5SQ13 230 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 OLFML2AQ68BL7 652 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 SHISA2Q6UWI4 295 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 PXT1Q8NFP0 134 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 OR51T1Q8NGJ9 327 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 OR5D14Q8NGL3 314 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 OR10K1Q8NGX5 313 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 GPR148Q8TDV2 347 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 CORO2AQ92828 525 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 TMEM80Q96HE8 168 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 ZNF714Q96N38 554 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 SSX3Q99909 188 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 CITED1Q99966 193 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 PPA2Q9H2U2 334 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 C16orf95Q9H693 158 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 DHDHQ9UQ10 334 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 ZNF281Q9Y2X9 895 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 LSM2Q9Y333 95 aaKnown RBP8.61□□□□□ -1.03
CD44-227ENST00000528086 FAM96BQ9Y3D0 163 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 LINC00312Q9Y6C7 94 aa8.61□□□□□ -1.03
CD44-227ENST00000528086 MGST3O14880 152 aa8.6□□□□□ -1.03
CD44-227ENST00000528086 GPX5O75715 221 aa8.6□□□□□ -1.03
CD44-227ENST00000528086 CLPXO76031 633 aa8.6□□□□□ -1.03
CD44-227ENST00000528086 CDRT1O95170 752 aa8.6□□□□□ -1.03
CD44-227ENST00000528086 CSN2P05814 226 aa8.6□□□□□ -1.03
CD44-227ENST00000528086 HCKP08631 526 aa8.6□□□□□ -1.03
CD44-227ENST00000528086 TMEM225BP0DP42 221 aa8.6□□□□□ -1.03
CD44-227ENST00000528086 RPL15P61313 204 aaKnown RBP8.6□□□□□ -1.03
CD44-227ENST00000528086 BLMHQ13867 455 aa8.6□□□□□ -1.03
CD44-227ENST00000528086 LY6EQ16553 131 aa8.6□□□□□ -1.03
CD44-227ENST00000528086 PRAMEF5Q5TYX0 476 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms