RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 A0A1W2PQL4 384 aaPredicted RBP18.74■□□□□ 0.59
CPSF1-202ENST00000527827 FAM172BPA6NC97 362 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 METTL15A6NJ78 407 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 ZAR1LA6NP61 321 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 LEUTXA8MZ59 168 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 SERPINA3P01011 423 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 PRKACAP17612 351 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 CDK2P24941 298 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 FLOT2Q14254 428 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 SPIN3Q5JUX0 258 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 ETV3LQ6ZN32 361 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 PRSS35Q8N3Z0 413 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 DNAAF1Q8NEP3 725 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 CORO2AQ92828 525 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 GAL3ST2Q9H3Q3 398 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 ZNF286AQ9HBT8 521 aa18.74■□□□□ 0.59
CPSF1-202ENST00000527827 IGKV1-9A0A0C4DH69 117 aa18.73■□□□□ 0.59
CPSF1-202ENST00000527827 LY6LH3BQJ8 138 aa18.73■□□□□ 0.59
CPSF1-202ENST00000527827 SIRPB1O00241 398 aa18.73■□□□□ 0.59
CPSF1-202ENST00000527827 CLIC3O95833 236 aa18.73■□□□□ 0.59
CPSF1-202ENST00000527827 CD34P28906 385 aa18.73■□□□□ 0.59
CPSF1-202ENST00000527827 POU3F4P49335 361 aa18.73■□□□□ 0.59
CPSF1-202ENST00000527827 RBP2P50120 134 aa18.73■□□□□ 0.59
CPSF1-202ENST00000527827 ATP1B3P54709 279 aa18.73■□□□□ 0.59
CPSF1-202ENST00000527827 GID4Q8IVV7 300 aa18.73■□□□□ 0.59
CPSF1-202ENST00000527827 UTP4Q969X6 686 aaKnown RBP18.73■□□□□ 0.59
CPSF1-202ENST00000527827 C10orf35Q96D05 121 aa18.73■□□□□ 0.59
CPSF1-202ENST00000527827 ADI1Q9BV57 179 aa18.73■□□□□ 0.59
CPSF1-202ENST00000527827 TAS2R3Q9NYW6 316 aa18.73■□□□□ 0.59
CPSF1-202ENST00000527827 TRGV10A0A0A0MS01 117 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 LOC107986453A0A1B0GWG9 222 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 APOL3O95236 402 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 KIR3DL2P43630 455 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 GLIPR1P48060 266 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 ARHGDIBP52566 201 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 CDC42P60953 191 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 HLA-DRB5Q30154 266 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 TPTE2P1Q5T6R2 138 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 MRPL41Q8IXM3 137 aaKnown RBP18.72■□□□□ 0.59
CPSF1-202ENST00000527827 RDH10Q8IZV5 341 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 OSR2Q8N2R0 312 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 PP6455Q8WZ26 134 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 ADAT3Q96EY9 351 aaPredicted RBP18.72■□□□□ 0.59
CPSF1-202ENST00000527827 HMG20AQ9NP66 347 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 KRT84Q9NSB2 600 aa18.72■□□□□ 0.59
CPSF1-202ENST00000527827 WARS2Q9UGM6 360 aaKnown RBP18.72■□□□□ 0.59
CPSF1-202ENST00000527827 BUB1B-PAK6H3BSN5 160 aa18.71■□□□□ 0.59
CPSF1-202ENST00000527827 SULT1C4O75897 302 aa18.71■□□□□ 0.59
CPSF1-202ENST00000527827 OR2H2O95918 312 aa18.71■□□□□ 0.59
CPSF1-202ENST00000527827 FAM107AO95990 144 aa18.71■□□□□ 0.59
CPSF1-202ENST00000527827 CYB5AP00167 134 aa18.71■□□□□ 0.59
CPSF1-202ENST00000527827 OR2T7P0C7T2 308 aa18.71■□□□□ 0.59
CPSF1-202ENST00000527827 MTCP1P56278 107 aa18.71■□□□□ 0.59
CPSF1-202ENST00000527827 CD69Q07108 199 aa18.71■□□□□ 0.59
CPSF1-202ENST00000527827 C9orf152Q5JTZ5 239 aa18.71■□□□□ 0.59
CPSF1-202ENST00000527827 UTF1Q5T230 341 aa18.71■□□□□ 0.59
CPSF1-202ENST00000527827 RNF166Q96A37 237 aaPredicted RBP18.71■□□□□ 0.59
CPSF1-202ENST00000527827 B9D2Q9BPU9 175 aa18.71■□□□□ 0.59
CPSF1-202ENST00000527827 GLS2Q9UI32 602 aa18.71■□□□□ 0.59
CPSF1-202ENST00000527827 GSTK1Q9Y2Q3 226 aa18.71■□□□□ 0.59
CPSF1-202ENST00000527827 IGKV1-12A0A0C4DH73 117 aa18.7■□□□□ 0.58
CPSF1-202ENST00000527827 E9PQ18 207 aa18.7■□□□□ 0.58
CPSF1-202ENST00000527827 SH2D1BO14796 132 aa18.7■□□□□ 0.58
CPSF1-202ENST00000527827 IGKV1D-12P01611 117 aa18.7■□□□□ 0.58
CPSF1-202ENST00000527827 CEACAM3P40198 252 aa18.7■□□□□ 0.58
CPSF1-202ENST00000527827 AESQ08117 197 aa18.7■□□□□ 0.58
CPSF1-202ENST00000527827 PDZK1IP1Q13113 114 aa18.7■□□□□ 0.58
CPSF1-202ENST00000527827 CCDC197Q8NCU1 140 aa18.7■□□□□ 0.58
CPSF1-202ENST00000527827 WWC2-AS2Q96NR7 200 aa18.7■□□□□ 0.58
CPSF1-202ENST00000527827 EXOSC4Q9NPD3 245 aaKnown RBP18.7■□□□□ 0.58
CPSF1-202ENST00000527827 UBCP0CG48 685 aaKnown RBP18.69■□□□□ 0.58
CPSF1-202ENST00000527827 ATF1P18846 271 aa18.69■□□□□ 0.58
CPSF1-202ENST00000527827 LMO1P25800 156 aa18.69■□□□□ 0.58
CPSF1-202ENST00000527827 HTR1FP30939 366 aa18.69■□□□□ 0.58
CPSF1-202ENST00000527827 ISL1P61371 349 aa18.69■□□□□ 0.58
CPSF1-202ENST00000527827 UTS2BQ765I0 119 aa18.69■□□□□ 0.58
CPSF1-202ENST00000527827 RNF144BQ7Z419 303 aa18.69■□□□□ 0.58
CPSF1-202ENST00000527827 OR10H4Q8NGA5 316 aa18.69■□□□□ 0.58
CPSF1-202ENST00000527827 CREB3L1Q96BA8 519 aa18.69■□□□□ 0.58
CPSF1-202ENST00000527827 ZNF649Q9BS31 505 aa18.69■□□□□ 0.58
CPSF1-202ENST00000527827 GPR61Q9BZJ8 451 aa18.69■□□□□ 0.58
CPSF1-202ENST00000527827 POMPQ9Y244 141 aa18.69■□□□□ 0.58
CPSF1-202ENST00000527827 A0A087X0M5 115 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 A0A1B0GX30 115 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 ODAMA1E959 279 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 FUOMA2VDF0 154 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 PSMB11A5LHX3 300 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 M0QZK8 103 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 TOR1AO14656 332 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 PRKACBP22694 351 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 THBS3P49746 956 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 KPNB1Q14974 876 aaKnown RBP18.68■□□□□ 0.58
CPSF1-202ENST00000527827 C17orf58Q2M2W7 97 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 KDM4DQ6B0I6 523 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 LHFPL2Q6ZUX7 228 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 ZNF329Q86UD4 541 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 RFT1Q96AA3 541 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 COQ2Q96H96 371 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 COMMD4Q9H0A8 199 aa18.68■□□□□ 0.58
CPSF1-202ENST00000527827 PCDHGB5Q9Y5G0 923 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms