RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TBL1YQ9BQ87 522 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 RSG1Q9BU20 258 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 C20orf24Q9BUV8 137 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 C1orf43Q9BWL3 253 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 TSSK6Q9BXA6 273 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 RTN4RQ9BZR6 473 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 TUBB1Q9H4B7 451 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 MED20Q9H944 212 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 APMAPQ9HDC9 416 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 RAB18Q9NP72 206 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 TRIM36Q9NQ86 728 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM106BQ9NUM4 274 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 MRPL16Q9NX20 251 aaKnown RBP3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 TFCP2L1Q9NZI6 479 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 SS18L2Q9UHA2 77 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 IL36AQ9UHA7 158 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 FBXW2Q9UKT8 454 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 CORO2BQ9UQ03 480 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 RASD1Q9Y272 281 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 PPIAL4AQ9Y536 164 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 MYLKQ15746 1914 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 TICRRQ7Z2Z1 1910 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 TRAV38-1A0A0B4J264 116 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 A0A1W2PR80 420 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 GXYLT2A0PJZ3 443 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM150BA6NC51 233 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF860A6NHJ4 632 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 FTCDNL1E5RQL4 147 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 F5H5T6 163 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 CLDN34H7C241 214 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 RAB27BO00194 218 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 HSD17B6O14756 317 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 HS3ST1O14792 307 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 LATO43561 262 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 KLK8O60259 260 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 OR1I1O60431 355 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF354AO60765 605 aaPredicted RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ALOX12BO75342 701 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 CNIH1O95406 144 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 SEMA4FO95754 770 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF682O95780 498 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 HAND1O96004 215 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 GAPDHP04406 335 aaKnown RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 HLA-DQB2P05538 268 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 FTH1P19P0C7X4 201 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 IGLC2P0DOY2 106 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 IGLC3P0DOY3 106 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 HOXB9P17482 250 aaPredicted RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 RPS4Y1P22090 263 aaKnown RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 SERPINA4P29622 427 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 HTR1FP30939 366 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 KDELR2P33947 212 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 P2RX1P51575 399 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 LBX1P52954 281 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 HMGCS2P54868 508 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 CLDN15P56746 228 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 TAS2R30P59541 319 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 WDR5P61964 334 aaKnown RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ARG2P78540 354 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 CFHR1Q03591 330 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 DMWDQ09019 674 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 HSD52Q0P140 79 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 PLCXD2Q0VAA5 305 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 SMAGPQ0VAQ4 97 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 PNRC1Q12796 327 aaPredicted RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 FOXF1Q12946 379 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 P2RY6Q15077 328 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 PDGFRLQ15198 375 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 POU2AF1Q16633 256 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 DUSP5Q16690 384 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ANKRD55Q3KP44 614 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ACSM3Q53FZ2 586 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM41BQ5BJD5 291 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 UBE2NLQ5JXB2 153 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 LYPLAL1Q5VWZ2 237 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 RAET1LQ5VY80 246 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF776Q68DI1 518 aaPredicted RBP3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF343Q6P1L6 599 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 NIPAL3Q6P499 406 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 PAQR6Q6TCH4 344 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 NPNTQ6UXI9 565 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 TOMM20LQ6UXN7 152 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 UNQ6126/PRO20091Q6UXV3 157 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 ASCL4Q6XD76 172 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 Q6ZRG5 221 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 C15orf39Q6ZRI6 1047 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 SMIM5Q71RC9 77 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 OLIG3Q7RTU3 272 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 MOGAT3Q86VF5 341 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 NR2C2APQ86WQ0 139 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 OR8I2Q8N0Y5 310 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 SMIM20Q8N5G0 67 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 CSNK1A1LQ8N752 337 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 KLHDC1Q8N7A1 406 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 TCTEX1D1Q8N7M0 179 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 SUMF2Q8NBJ7 301 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 OR8G5Q8NG78 346 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 OR52B4Q8NGK2 314 aa3.19□□□□□ -1.9
CLNS1A-209ENST00000527299 OR1B1Q8NGR6 318 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms