RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 ACAA1P09110 424 aaPredicted RBP10.07□□□□□ -0.8
LINC01001-201ENST00000526704 SMIM6P0DI80 62 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 EDN3P14138 238 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 RGS19P49795 217 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 FUT6P51993 359 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 CARD18P57730 90 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 NHLH2Q02577 135 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 HMGN3Q15651 99 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 CEACAM16Q2WEN9 425 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 COMMD1Q8N668 190 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 OR4D5Q8NGN0 318 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 OR14L1PQ8NHC6 308 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 NANPQ8TBE9 248 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 HIST1H2BAQ96A08 127 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 TP53RKQ96S44 253 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 FOXB1Q99853 325 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 C19orf12Q9NSK7 152 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 LUZP4Q9P127 313 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 ZNF391Q9UJN7 358 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 TINAGQ9UJW2 476 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 COL27A1Q8IZC6 1860 aaPredicted RBP10.07□□□□□ -0.8
LINC01001-201ENST00000526704 TCN2P20062 427 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 CAMLGP49069 296 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 AWAT1Q58HT5 328 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 PMS2CLQ68D20 193 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 CALHM1Q8IU99 346 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 BATF2Q8N1L9 274 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 SLC35G3Q8N808 338 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 KCNE4Q8WWG9 221 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 ADGRG7Q96K78 797 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 ZNF251Q9BRH9 671 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 RGCCQ9H4X1 137 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 SLC7A11Q9UPY5 501 aa10.07□□□□□ -0.8
LINC01001-201ENST00000526704 TNRC6AQ8NDV7 1962 aaKnown RBP10.07□□□□□ -0.8
LINC01001-201ENST00000526704 LRRC3CA6NJW4 275 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 ST8SIA3O43173 380 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 S100A6P06703 90 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 RFPL3SP0C7P2 107 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 GLP1RP43220 463 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 HERV-K104P61576 105 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 MALLQ13021 153 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 TRIM61Q5EBN2 209 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 CCDC71LQ8N9Z2 235 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 PIGCQ92535 297 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 SYT3Q9BQG1 590 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 C11orf1Q9H5F2 150 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 RPS10P5Q9NQ39 176 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 GSN-AS1Q9NRJ2 163 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 FREM2Q5SZK8 3169 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 ZNF816-ZNF321PA0A0X1KG74 233 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 PPYP01298 95 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 S100A8P05109 93 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 S100A9P06702 114 aaKnown RBP10.06□□□□□ -0.8
LINC01001-201ENST00000526704 CLDN15P56746 228 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 TMEM211Q6ICI0 200 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 MEX3BQ6ZN04 569 aaKnown RBP10.06□□□□□ -0.8
LINC01001-201ENST00000526704 HSD17B11Q8NBQ5 300 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 OR10D3Q8NH80 312 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 BOD1Q96IK1 185 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 ZNF442Q9H7R0 627 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 SPACA1Q9HBV2 294 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 GPR35Q9HC97 309 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 TMED3Q9Y3Q3 217 aa10.06□□□□□ -0.8
LINC01001-201ENST00000526704 MED19A0JLT2 244 aaPredicted RBP10.05□□□□□ -0.8
LINC01001-201ENST00000526704 NTN3O00634 580 aaPredicted RBP10.05□□□□□ -0.8
LINC01001-201ENST00000526704 MMP7P09237 267 aaPredicted RBP10.05□□□□□ -0.8
LINC01001-201ENST00000526704 PTAFRP25105 342 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 FOLR3P41439 243 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 NPBWR2P48146 333 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 RAB5BP61020 215 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 ZNF611Q8N823 705 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 OR2V1Q8NHB1 315 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 SGCZQ96LD1 299 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 P4HTMQ9NXG6 502 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 STRAPQ9Y3F4 350 aaKnown RBP10.05□□□□□ -0.8
LINC01001-201ENST00000526704 C7orf77A4D0Y5 90 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 OR7C1O76099 320 aaPredicted RBP10.05□□□□□ -0.8
LINC01001-201ENST00000526704 P04436 131 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 SNRNP70P08621 437 aaKnown RBP10.05□□□□□ -0.8
LINC01001-201ENST00000526704 FUT3P21217 361 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 PCBD1P61457 104 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 EWSR1Q01844 656 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC01001-201ENST00000526704 Q0VFX4 171 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 RIPPLY2Q5TAB7 128 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 KDF1Q8NAX2 398 aaPredicted RBP10.05□□□□□ -0.8
LINC01001-201ENST00000526704 TCEAL3Q969E4 200 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 SPSB4Q96A44 273 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 IP6K3Q96PC2 410 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 TECTBQ96PL2 329 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 EIF5A2Q9GZV4 153 aaKnown RBP10.05□□□□□ -0.8
LINC01001-201ENST00000526704 SIT1Q9Y3P8 196 aa10.05□□□□□ -0.8
LINC01001-201ENST00000526704 KMT2EQ8IZD2 1858 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 C3orf85A0A1B0GTC6 90 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 NKX2-6A6NCS4 301 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 K7N7A8 449 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 MPPED1O15442 326 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 PRH1P02810 166 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 ZNF44P15621 663 aa10.04□□□□□ -0.8
LINC01001-201ENST00000526704 PPP1CCP36873 323 aaKnown RBP10.04□□□□□ -0.8
LINC01001-201ENST00000526704 PMELP40967 661 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms