RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 EGLN1Q9GZT9 426 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ZNF696Q9H7X3 374 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ISG20L2Q9H9L3 353 aaKnown RBP3.77□□□□□ -1.81
USP48-211ENST00000526044 CDH20Q9HBT6 801 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ACOT13Q9NPJ3 140 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 DDX28Q9NUL7 540 aaKnown RBP3.77□□□□□ -1.81
USP48-211ENST00000526044 MRM2Q9UI43 246 aaKnown RBP3.77□□□□□ -1.81
USP48-211ENST00000526044 GNG8Q9UK08 70 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 KLF2Q9Y5W3 355 aaPredicted RBP3.77□□□□□ -1.81
USP48-211ENST00000526044 POLEQ07864 2286 aa3.77□□□□□ -1.81
USP48-211ENST00000526044 ATRXP46100 2492 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 TRBV2A0A0J9YWF9 115 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 PRR32B1ATL7 298 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 E9PI62 339 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 LOC110117498-PIK3R3F6TDL0 507 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 C19orf84I3L1E1 186 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 M0R135 149 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 DVL1O14640 695 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 OGG1O15527 345 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 LANCL1O43813 399 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 NGFP01138 241 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 MT-ND2P03891 347 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 HTR1AP08908 422 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 ACSM4P0C7M7 580 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 CECR9P0C854 216 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 HSMCR30P0CW71 290 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 RNF224P0DH78 156 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 TUBG1P23258 451 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 PTBP1P26599 531 aaKnown RBP eCLIP3.76□□□□□ -1.81
USP48-211ENST00000526044 TGM4P49221 684 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 CX3CR1P49238 355 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 RGS6P49758 472 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 GTF2A1P52655 376 aaPredicted RBP3.76□□□□□ -1.81
USP48-211ENST00000526044 DVL1P1P54792 670 aaPredicted RBP3.76□□□□□ -1.81
USP48-211ENST00000526044 ZNF121P58317 390 aaPredicted RBP3.76□□□□□ -1.81
USP48-211ENST00000526044 NAAAQ02083 359 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 GPR50Q13585 617 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 ZNF829Q3KNS6 432 aaPredicted RBP3.76□□□□□ -1.81
USP48-211ENST00000526044 CCDC58Q4VC31 144 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 LBHQ53QV2 105 aaPredicted RBP3.76□□□□□ -1.81
USP48-211ENST00000526044 BEX5Q5H9J7 111 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 ARMCX4Q5H9R4 360 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 NCMAPQ5T1S8 102 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 TMEM244Q5VVB8 128 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 TEX38Q6PEX7 206 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 CIARTQ8N365 385 aaPredicted RBP3.76□□□□□ -1.81
USP48-211ENST00000526044 OR52H1Q8NGJ2 320 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 OR1J1Q8NGS3 322 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 FCGR1BQ92637 280 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 RORBQ92753 470 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 APOBEC3DQ96AK3 386 aaPredicted RBP3.76□□□□□ -1.81
USP48-211ENST00000526044 SGK3Q96BR1 496 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 PELI1Q96FA3 418 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 ZNF799Q96GE5 643 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 OR5M11Q96RB7 305 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 MGLLQ99685 303 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 PBOV1Q9GZY1 135 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 VCX2Q9H322 139 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 GPN1Q9HCN4 374 aaPredicted RBP3.76□□□□□ -1.81
USP48-211ENST00000526044 VCX3AQ9NNX9 186 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 ISYNA1Q9NPH2 558 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 TUBG2Q9NRH3 451 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 ACOXLQ9NUZ1 547 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 NPAP1Q9NZP6 1156 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 ATPIF1Q9UII2 106 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 OR52A1Q9UKL2 312 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 STARD10Q9Y365 291 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 R4GMQ9 66 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 PCNX1Q96RV3 2341 aa3.76□□□□□ -1.81
USP48-211ENST00000526044 IGSF10Q6WRI0 2623 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 PRRC2CQ9Y520 2896 aaKnown RBP3.75□□□□□ -1.81
USP48-211ENST00000526044 TLN1Q9Y490 2541 aaKnown RBP3.75□□□□□ -1.81
USP48-211ENST00000526044 IGHV2OR16-5A0A0B4J2B6 119 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 A0A1W2PP11 408 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 VGLL3A8MV65 326 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 ABCD4O14678 606 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 PLPP2O43688 288 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 SRSF10O75494 262 aaKnown RBP3.75□□□□□ -1.81
USP48-211ENST00000526044 CLDN1O95832 211 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 CLPTM1O96005 669 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 LALBAP00709 142 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 ISG15P05161 165 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 ZNF735P0CB33 412 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 SLC2A1P11166 492 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 CELP19835 753 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 PCMT1P22061 227 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 CFL1P23528 166 aaKnown RBP3.75□□□□□ -1.81
USP48-211ENST00000526044 CALCRP30988 508 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 OTX1P32242 354 aaPredicted RBP3.75□□□□□ -1.81
USP48-211ENST00000526044 GLRXP35754 106 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 FABP6P51161 128 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 TAS2R43P59537 309 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 PPP1CBP62140 327 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 BSPH1Q075Z2 132 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 SLC3A1Q07837 685 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 MLLT11Q13015 90 aaPredicted RBP3.75□□□□□ -1.81
USP48-211ENST00000526044 TPBGQ13641 420 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 TRAM1Q15629 374 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 NEDD8Q15843 81 aa3.75□□□□□ -1.81
USP48-211ENST00000526044 MOGQ16653 247 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms