RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 CEACAM16Q2WEN9 425 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 LYPD8Q6UX82 237 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 DLEU7Q6UYE1 221 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 BTLAQ7Z6A9 289 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 OR13H1Q8NG92 308 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 APOBEC3DQ96AK3 386 aaPredicted RBP12.2□□□□□ -0.46
LRRK1-202ENST00000525284 LRP12Q9Y561 859 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 DHHO43323 396 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 HIST1H1EP10412 219 aaKnown RBP12.2□□□□□ -0.46
LRRK1-202ENST00000525284 HIST1H1BP16401 226 aaKnown RBP12.2□□□□□ -0.46
LRRK1-202ENST00000525284 FAM209BQ5JX69 171 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 RTN4RL1Q86UN2 441 aaPredicted RBP12.2□□□□□ -0.46
LRRK1-202ENST00000525284 ZNF735P0CB33 412 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 SLC35B1P78383 322 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 SMAGPQ0VAQ4 97 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 JOSD1Q15040 202 aaPredicted RBP12.19□□□□□ -0.46
LRRK1-202ENST00000525284 DYNLRB2Q8TF09 96 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 ZNF418Q8TF45 676 aaPredicted RBP12.19□□□□□ -0.46
LRRK1-202ENST00000525284 MS4A6EQ96DS6 147 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 TMEM204Q9BSN7 226 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 PPIL1Q9Y3C6 166 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 IGKV3OR2-268A0A0C4DH90 116 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 A0A1W2PR48 441 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 SOD3P08294 240 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 AGERQ15109 404 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 TMEM255AQ5JRV8 349 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 PRSS54Q6PEW0 395 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 ADAMTSL4Q6UY14 1074 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 MRGPRDQ8TDS7 321 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 ZNF296Q8WUU4 475 aaPredicted RBP12.19□□□□□ -0.46
LRRK1-202ENST00000525284 B9D1Q9UPM9 204 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 LAMA4Q16363 1823 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 IDSB3KWA1 339 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 RBFOX2O43251 390 aaKnown RBP eCLIP12.19□□□□□ -0.46
LRRK1-202ENST00000525284 FGF17O60258 216 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 IGHV4-34P06331 123 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 SBK3P0C264 359 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 RBM11P57052 281 aaKnown RBP12.19□□□□□ -0.46
LRRK1-202ENST00000525284 BTG2P78543 158 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 OR8I2Q8N0Y5 310 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 GBGT1Q8N5D6 347 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 GABRG3Q99928 467 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 DAPP1Q9UN19 280 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 PDE6DO43924 150 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 GAB4Q2WGN9 574 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 BAHD1Q8TBE0 780 aaPredicted RBP12.19□□□□□ -0.46
LRRK1-202ENST00000525284 HDHD3Q9BSH5 251 aaPredicted RBP12.19□□□□□ -0.46
LRRK1-202ENST00000525284 HMX2A2RU54 273 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 FCMRO60667 390 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 PGA4P0DJD7 388 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 PGA5P0DJD9 388 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 NOXO1Q8NFA2 376 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 ASCL3Q9NQ33 180 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 VAX2Q9UIW0 290 aa12.19□□□□□ -0.46
LRRK1-202ENST00000525284 H3BQ15 152 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 GNG3P63215 75 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 ROM1Q03395 351 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 FAM78AQ5JUQ0 283 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 OR4C3Q8NH37 302 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 FAM222BQ8WU58 562 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 ALG14Q96F25 216 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 RHNO1Q9BSD3 238 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 AMMECR1Q9Y4X0 333 aaPredicted RBP12.18□□□□□ -0.46
LRRK1-202ENST00000525284 RER1O15258 196 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 HIST1H1DP16402 221 aaKnown RBP12.18□□□□□ -0.46
LRRK1-202ENST00000525284 C10orf113Q5VZT2 155 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 FOXQ1Q9C009 403 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 MRPS16Q9Y3D3 137 aaKnown RBP12.18□□□□□ -0.46
LRRK1-202ENST00000525284 TBL2Q9Y4P3 447 aaKnown RBP12.18□□□□□ -0.46
LRRK1-202ENST00000525284 MYH7BA7E2Y1 1941 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 KIR3DL2P43630 455 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 ZNF83P51522 516 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 AQP6Q13520 282 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 ZNF766Q5HY98 468 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 C12orf54Q6X4T0 127 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 OR4X1Q8NH49 305 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 OR1F12Q8NHA8 337 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 RASL11BQ9BPW5 248 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 LDLRAD4O15165 306 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 BRS3P32247 399 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 UBE2V2Q15819 145 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 C16orf82Q7Z2V1 217 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 C3orf80F5H4A9 247 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 PLAUP00749 431 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 Q8IYB0 196 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 ST8SIA1Q92185 356 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 PDXPQ96GD0 296 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 SLC25A19Q9HC21 320 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 OR2W1Q9Y3N9 320 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 GSG1Q2KHT4 349 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 HFEQ30201 348 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 SIRT7Q9NRC8 400 aa12.18□□□□□ -0.46
LRRK1-202ENST00000525284 LINC01553A4QN01 128 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 FOXB2Q5VYV0 432 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 NEURL2Q9BR09 285 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 MS4A7Q9GZW8 240 aaPredicted RBP12.17□□□□□ -0.46
LRRK1-202ENST00000525284 KIR3DX1Q9H7L2 352 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 LRP6O75581 1613 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 KISS1Q15726 138 aa12.17□□□□□ -0.46
LRRK1-202ENST00000525284 PARM1Q6UWI2 310 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms