RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 SLC36A1Q7Z2H8 476 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 BPIFB2Q8N4F0 458 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 ZNF611Q8N823 705 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 DTX3Q8N9I9 347 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 CHST4Q8NCG5 386 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 OR56B2PQ8NGI1 322 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 OR51S1Q8NGJ8 323 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 OR5P3Q8WZ94 311 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 NEUROG1Q92886 237 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 GCDHQ92947 438 aaPredicted RBP6.03□□□□□ -1.44
VPS11-201ENST00000524454 PLPPR2Q96GM1 343 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 OR2A7Q96R45 310 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 NICN1Q9BSH3 213 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 RTL8AQ9BWD3 113 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 PAPOLGQ9BWT3 736 aaKnown RBP6.03□□□□□ -1.44
VPS11-201ENST00000524454 PECRQ9BY49 303 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 KCNK15Q9H427 330 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 POFUT1Q9H488 388 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 CDH20Q9HBT6 801 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 DECR2Q9NUI1 292 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 TREM2Q9NZC2 230 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 RCC2Q9P258 522 aaKnown RBP6.03□□□□□ -1.44
VPS11-201ENST00000524454 ING4Q9UNL4 249 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 POLDIP2Q9Y2S7 368 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 KCNK7Q9Y2U2 307 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 STARD10Q9Y365 291 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 NOTCH2Q04721 2471 aa6.03□□□□□ -1.44
VPS11-201ENST00000524454 TACC2O95359 2948 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 TRBV6-6A0A0A6YYG2 114 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 A0A0B4J2A0 478 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 PIGBOS1A0A0B4J2F0 54 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 TMEM82A0PJX8 343 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 LRP5LA4QPB2 252 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 H7C1Q1 480 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 J3QT63 122 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 SOCS1O15524 211 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 SSNA1O43805 119 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 NOS1APO75052 506 aaPredicted RBP6.02□□□□□ -1.45
VPS11-201ENST00000524454 AMY2AP04746 511 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 IFNA6P05013 189 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 GSTT2P0CG29 244 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 ZNF35P13682 527 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 GNB3P16520 340 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 SERPINA2P20848 420 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 C4BPBP20851 252 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 FUT3P21217 361 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 KITLGP21583 273 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 DNASE1P24855 282 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 UCP2P55851 309 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 SEC61A1P61619 476 aaKnown RBP6.02□□□□□ -1.45
VPS11-201ENST00000524454 PPP1CBP62140 327 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 MRPS15P82914 257 aaKnown RBP6.02□□□□□ -1.45
VPS11-201ENST00000524454 TESK1Q15569 626 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 RNASE12Q5GAN4 147 aaKnown RBP6.02□□□□□ -1.45
VPS11-201ENST00000524454 SHEQ5VZ18 495 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 MBNL2Q5VZF2 373 aaKnown RBP6.02□□□□□ -1.45
VPS11-201ENST00000524454 SFRP4Q6FHJ7 346 aaPredicted RBP6.02□□□□□ -1.45
VPS11-201ENST00000524454 RFPL4BQ6ZWI9 263 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 MOB3CQ70IA8 216 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 OVCH2Q7RTZ1 564 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 C1QL2Q7Z5L3 287 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 PEG10Q86TG7 708 aaKnown RBP6.02□□□□□ -1.45
VPS11-201ENST00000524454 SLC25A42Q86VD7 318 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 GLCCI1Q86VQ1 547 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 LHFPL1Q86WI0 220 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 TMEM185AQ8NFB2 350 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 BEST4Q8NFU0 473 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 OR5AP2Q8NGF4 316 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 OR4K15Q8NH41 348 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 OR51F2Q8NH61 342 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 TERB2Q8NHR7 220 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 ZFAND1Q8TCF1 268 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 ZNF431Q8TF32 576 aaPredicted RBP6.02□□□□□ -1.45
VPS11-201ENST00000524454 NUDCD2Q8WVJ2 157 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 HPSE2Q8WWQ2 592 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 EMG1Q92979 244 aaKnown RBP6.02□□□□□ -1.45
VPS11-201ENST00000524454 FBXW5Q969U6 566 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 ZNF486Q96H40 463 aaPredicted RBP6.02□□□□□ -1.45
VPS11-201ENST00000524454 ARHGAP5-AS1Q96IT6 56 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 RNF170Q96K19 258 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 SPACA5Q96QH8 159 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 MICU1Q9BPX6 476 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 C1QTNF6Q9BXI9 259 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 GON7Q9BXV9 100 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 TMPRSS13Q9BYE2 586 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 SEBOXQ9HB31 216 aaPredicted RBP6.02□□□□□ -1.45
VPS11-201ENST00000524454 RANGRFQ9HD47 186 aaPredicted RBP6.02□□□□□ -1.45
VPS11-201ENST00000524454 C12orf4Q9NQ89 552 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 PLEKHJ1Q9NW61 149 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 SHPKQ9UHJ6 478 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 PAIP2BQ9ULR5 123 aaKnown RBP6.02□□□□□ -1.45
VPS11-201ENST00000524454 MGAT4AQ9UM21 535 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 OTOGQ6ZRI0 2925 aa6.02□□□□□ -1.45
VPS11-201ENST00000524454 ANKHD1Q8IWZ3 2542 aaKnown RBP6.01□□□□□ -1.45
VPS11-201ENST00000524454 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.01□□□□□ -1.45
VPS11-201ENST00000524454 FAM230AA0A1W2PPH8 454 aa6.01□□□□□ -1.45
VPS11-201ENST00000524454 ZNF850A8MQ14 1090 aa6.01□□□□□ -1.45
VPS11-201ENST00000524454 TRAPPC2LH3BP13 241 aa6.01□□□□□ -1.45
VPS11-201ENST00000524454 PTBP3O95758 552 aaKnown RBP6.01□□□□□ -1.45
VPS11-201ENST00000524454 PTHLHP12272 177 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms