RNA–Protein interactions for RNA: ENST00000524111.5

SREK1-215, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 4,074 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-215ENST00000524111 TFAP2EQ6VUC0 442 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 BPIFCQ8NFQ6 507 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 FAM213BQ8TBF2 198 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 TMEM54Q969K7 222 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 SAV1Q9H4B6 383 aaPredicted RBP7.54□□□□□ -1.2
SREK1-215ENST00000524111 LIPGQ9Y5X9 500 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 MGAQ8IWI9 3026 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 ZNF716A6NP11 495 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 KRBOX1C9JBD0 128 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 SSSCA1O60232 199 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 C10orf128Q5T292 105 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 AADACL3Q5VUY0 350 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 H3F3CQ6NXT2 135 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 GGNQ86UU5 652 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 MYPOPQ86VE0 399 aaPredicted RBP7.54□□□□□ -1.2
SREK1-215ENST00000524111 ZNF808Q8N4W9 903 aaPredicted RBP7.54□□□□□ -1.2
SREK1-215ENST00000524111 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
SREK1-215ENST00000524111 ZPBPQ9BS86 351 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 KIF25Q9UIL4 384 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 ANKRD11Q6UB99 2663 aaPredicted RBP7.54□□□□□ -1.2
SREK1-215ENST00000524111 CACNA1AO00555 2505 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 LOC390937A0A1W2PQ73 354 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 GPR31O00270 319 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 DEGS1O15121 323 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 TUSC2O75896 110 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 GP1BAP07359 652 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 IZUMO4Q1ZYL8 232 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 RPUSD3Q6P087 351 aaKnown RBP7.54□□□□□ -1.2
SREK1-215ENST00000524111 TMEM65Q6PI78 240 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 TMEM178AQ8NBL3 297 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 RFESDQ8TAC1 157 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 RNF141Q8WVD5 230 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 APOBEC3DQ96AK3 386 aaPredicted RBP7.54□□□□□ -1.2
SREK1-215ENST00000524111 CNTNAP3BQ96NU0 1288 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 SUCNR1Q9BXA5 334 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 SLC2A9Q9NRM0 540 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 USF3Q68DE3 2245 aa7.54□□□□□ -1.2
SREK1-215ENST00000524111 BOD1L1Q8NFC6 3051 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 INTS1Q8N201 2190 aaKnown RBP7.53□□□□□ -1.2
SREK1-215ENST00000524111 IGKV1-27A0A075B6S5 117 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 SYNGR3O43761 229 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 C1QL1O75973 258 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 NEURL1O76050 574 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 SP1P08047 785 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 FCGR3AP08637 254 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 CSRP1P21291 193 aaKnown RBP7.53□□□□□ -1.2
SREK1-215ENST00000524111 JMJD6Q6NYC1 403 aaPredicted RBP7.53□□□□□ -1.2
SREK1-215ENST00000524111 DPPA2Q7Z7J5 298 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 RRNAD1Q96FB5 475 aaKnown RBP7.53□□□□□ -1.2
SREK1-215ENST00000524111 TRAF4Q9BUZ4 470 aaPredicted RBP7.53□□□□□ -1.2
SREK1-215ENST00000524111 ZNF552Q9H707 407 aaPredicted RBP7.53□□□□□ -1.2
SREK1-215ENST00000524111 FBXL17Q9UF56 701 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 IGKV1-12A0A0C4DH73 117 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 TTLL8A6PVC2 850 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 B3GALNT1O75752 331 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 IGKV1D-12P01611 117 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 RSPO1Q2MKA7 263 aaPredicted RBP7.53□□□□□ -1.2
SREK1-215ENST00000524111 Q6ZRG5 221 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 LGI3Q8N145 548 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 SLC30A7Q8NEW0 376 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 OR1J1Q8NGS3 322 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 OR8U1Q8NH10 309 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 DHRS9Q9BPW9 319 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 OCSTAMPQ9BR26 566 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 FN3KRPQ9HA64 309 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 NBEAQ8NFP9 2946 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 RNF222A6NCQ9 220 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 CDIPTO14735 213 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 TIMM8AO60220 97 aaPredicted RBP7.53□□□□□ -1.2
SREK1-215ENST00000524111 SCTP09683 121 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 GABRA2P47869 451 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 Q96M66 194 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 PRELID1Q9Y255 219 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 CEP192Q8TEP8 1941 aa7.53□□□□□ -1.2
SREK1-215ENST00000524111 TPPPO94811 219 aa7.52□□□□□ -1.2
SREK1-215ENST00000524111 SNRNP70P08621 437 aaKnown RBP7.52□□□□□ -1.2
SREK1-215ENST00000524111 ACP1P24666 158 aa7.52□□□□□ -1.2
SREK1-215ENST00000524111 TMEM33P57088 247 aa7.52□□□□□ -1.2
SREK1-215ENST00000524111 POLR2GP62487 172 aaKnown RBP eCLIP7.52□□□□□ -1.2
SREK1-215ENST00000524111 QRFPP83859 136 aa7.52□□□□□ -1.2
SREK1-215ENST00000524111 RTL6Q6ICC9 239 aa7.52□□□□□ -1.2
SREK1-215ENST00000524111 MDP1Q86V88 176 aa7.52□□□□□ -1.2
SREK1-215ENST00000524111 NINJ1Q92982 152 aa7.52□□□□□ -1.2
SREK1-215ENST00000524111 TMEM230Q96A57 120 aa7.52□□□□□ -1.2
SREK1-215ENST00000524111 OR2J1Q9GZK6 312 aa7.52□□□□□ -1.2
SREK1-215ENST00000524111 ZNF703Q9H7S9 590 aaPredicted RBP7.52□□□□□ -1.2
SREK1-215ENST00000524111 RAB18Q9NP72 206 aa7.52□□□□□ -1.2
SREK1-215ENST00000524111 ERRFI1Q9UJM3 462 aaPredicted RBP7.52□□□□□ -1.2
SREK1-215ENST00000524111 TINAGQ9UJW2 476 aa7.52□□□□□ -1.2
SREK1-215ENST00000524111 FBXO7Q9Y3I1 522 aa7.52□□□□□ -1.2
SREK1-215ENST00000524111 F8VVB4 439 aa7.52□□□□□ -1.21
SREK1-215ENST00000524111 F8VWA3 439 aa7.52□□□□□ -1.21
SREK1-215ENST00000524111 H0YIZ8 118 aa7.52□□□□□ -1.21
SREK1-215ENST00000524111 H7C2Y5 167 aa7.52□□□□□ -1.21
SREK1-215ENST00000524111 ST8SIA3O43173 380 aa7.52□□□□□ -1.21
SREK1-215ENST00000524111 IL2RGP31785 369 aa7.52□□□□□ -1.21
SREK1-215ENST00000524111 ERVS71-1P61550 626 aa7.52□□□□□ -1.21
SREK1-215ENST00000524111 TMEM182Q6ZP80 229 aaPredicted RBP7.52□□□□□ -1.21
SREK1-215ENST00000524111 OVCH2Q7RTZ1 564 aa7.52□□□□□ -1.21
SREK1-215ENST00000524111 TPRX1Q8N7U7 411 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms