RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 HPSE2Q8WWQ2 592 aa15.43■□□□□ 0.06
IKBKB-228ENST00000523517 SCRT1Q9BWW7 348 aa15.43■□□□□ 0.06
IKBKB-228ENST00000523517 PAX6P26367 422 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 NPBWR2P48146 333 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 KCNJ3P48549 501 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 GUK1Q16774 197 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 AKIRIN2Q53H80 203 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 OR4D5Q8NGN0 318 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 MAFAQ8NHW3 353 aaPredicted RBP15.42■□□□□ 0.06
IKBKB-228ENST00000523517 ABHD3Q8WU67 409 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 C1QTNF5Q9BXJ0 243 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 PARPBPQ9NWS1 579 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 PATE3B3GLJ2 98 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 MPPED1O15442 326 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 CYTIPO60759 359 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 FOLR2P14207 255 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 FHITP49789 147 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 RAB5CP51148 216 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 NOVA1P51513 510 aaKnown RBP15.42■□□□□ 0.06
IKBKB-228ENST00000523517 IGSF11Q5DX21 431 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 TRIM61Q5EBN2 209 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 MEX3BQ6ZN04 569 aaKnown RBP15.42■□□□□ 0.06
IKBKB-228ENST00000523517 ZFP82Q8N141 532 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 BATF2Q8N1L9 274 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 CPEB3Q8NE35 698 aaKnown RBP15.42■□□□□ 0.06
IKBKB-228ENST00000523517 C2CD4CQ8TF44 421 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 ZNF845Q96IR2 970 aaPredicted RBP15.42■□□□□ 0.06
IKBKB-228ENST00000523517 SH3BGRL3Q9H299 93 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 RNF122Q9H9V4 155 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 PLSCR2Q9NRY7 297 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 C19orf12Q9NSK7 152 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 DEPPQ9NTK1 212 aa15.42■□□□□ 0.06
IKBKB-228ENST00000523517 C3orf85A0A1B0GTC6 90 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 PQLC2LA1A4F0 135 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 C15orf54Q8N8G6 183 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 POM121Q96HA1 1249 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 CLCC1Q96S66 551 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 PRDM14Q9GZV8 571 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 RYDENQ9NUL5 291 aaKnown RBP15.41■□□□□ 0.06
IKBKB-228ENST00000523517 CFAP54Q96N23 3096 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 MYO7BQ6PIF6 2116 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 AKR1C3P42330 323 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 GNMTQ14749 295 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 ACER2Q5QJU3 275 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 WDR5BQ86VZ2 330 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 HSD17B11Q8NBQ5 300 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 C14orf79Q96F83 325 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 COA4Q9NYJ1 87 aa15.41■□□□□ 0.06
IKBKB-228ENST00000523517 STRAPQ9Y3F4 350 aaKnown RBP15.41■□□□□ 0.06
IKBKB-228ENST00000523517 RPL36A-HNRNPH2H7BZ11 118 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 C1QL1O75973 258 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 IGHV3-9P01782 118 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 PRH1P02810 166 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 GDF1P27539 372 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 SRPXP78539 464 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 FAM185AQ8N0U4 392 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 Q8NFD4 153 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 EXTL1Q92935 676 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 CPNE4Q96A23 557 aaPredicted RBP15.4■□□□□ 0.06
IKBKB-228ENST00000523517 EGLN1Q9GZT9 426 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 EIF5A2Q9GZV4 153 aaKnown RBP15.4■□□□□ 0.06
IKBKB-228ENST00000523517 RPS10P5Q9NQ39 176 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 MRPS18CQ9Y3D5 142 aaKnown RBP15.4■□□□□ 0.06
IKBKB-228ENST00000523517 TMEM265A0A087WTH1 108 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 PINLYPA6NC86 204 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 NKX2-6A6NCS4 301 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 TRDCB7Z8K6 153 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 GNRHRP30968 328 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 COLCA1Q6ZS62 124 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 DPPA2Q7Z7J5 298 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 TMEM222Q9H0R3 208 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 TCFL5Q9UL49 500 aa15.4■□□□□ 0.06
IKBKB-228ENST00000523517 CDS2O95674 445 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 LMO1P25800 156 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 EWSR1Q01844 656 aaKnown RBP eCLIP15.39■□□□□ 0.05
IKBKB-228ENST00000523517 KDF1Q8NAX2 398 aaPredicted RBP15.39■□□□□ 0.05
IKBKB-228ENST00000523517 TMEM45BQ96B21 275 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 BOD1Q96IK1 185 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 C12orf57Q99622 126 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 IER2Q9BTL4 223 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 C11orf1Q9H5F2 150 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 SPACA1Q9HBV2 294 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM86C1Q9NVL1 165 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A10PA6NDY2 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A18PA6NE21 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A16PA6NEW6 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A20PA6NIJ5 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A8PA6NJQ4 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A7PA6NKC0 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A22PA8MWA6 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A12PA8MX19 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A5PA8MXJ8 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A23PA8MXZ1 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A15PP0C7V4 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A13PP0C7W8 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A14PP0C7W9 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 FAM90A24PP0C7X0 464 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 GFRA1P56159 465 aa15.39■□□□□ 0.05
IKBKB-228ENST00000523517 HABP2Q14520 560 aaPredicted RBP15.39■□□□□ 0.05
IKBKB-228ENST00000523517 NRN1LQ496H8 165 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms