RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	IGLL1	P15814	213 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	UGT2B7	P16662	529 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	ALOX5AP	P20292	161 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	ZBTB25	P24278	435 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	CXCR1	P25024	350 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	LEP	P41159	167 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	OR3A4P	P47883	348 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	RPL29	P47914	159 aa	Known RBP	3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	SERPINB10	P48595	397 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	STC1	P52823	247 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	CLDN6	P56747	220 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	ZNF121	P58317	390 aa	Predicted RBP	3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	SLC35B1	P78383	322 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	GTF2B	Q00403	316 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	EGFEM1P	Q0D2K5	195 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	TFDP2	Q14188	446 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	KIR2DS1	Q14954	304 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	KCNJ8	Q15842	424 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	DUSP7	Q16829	419 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	TBC1D28	Q2M2D7	210 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	TRMT5	Q32P41	509 aa	Known RBP	3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	CEACAM21	Q3KPI0	293 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	TNFAIP8L3	Q5GJ75	292 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	OR2B11	Q5JQS5	317 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	OR10J3	Q5JRS4	329 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	SLC25A48	Q6ZT89	311 aa	Known RBP	3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	NIT1	Q86X76	327 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	SLC30A8	Q8IWU4	369 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	SMIM20	Q8N5G0	67 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	GPR32P1	Q8NGA4	272 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	ACER1	Q8TDN7	264 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	GHSR	Q92847	366 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	CCDC126	Q96EE4	140 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	MED8	Q96G25	268 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	SDSL	Q96GA7	329 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	VAT1	Q99536	393 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	MCHR1	Q99705	422 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	EBF4	Q9BQW3	602 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	MND1	Q9BWT6	205 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	CHIA	Q9BZP6	476 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	NXF5	Q9H1B4	397 aa	Known RBP	3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298		Q9H3A6	140 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	POLD4	Q9HCU8	107 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	FGF20	Q9NP95	211 aa	Predicted RBP	3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	DDIT4	Q9NX09	232 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	OR1A1	Q9P1Q5	309 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	NEU3	Q9UQ49	428 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	SLC35A3	Q9Y2D2	325 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	PAPPA	Q13219	1627 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	ARHGAP21	Q5T5U3	1957 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	CHD5	Q8TDI0	1954 aa		3.21	□□□□□ -1.9
CTNNA1-238	ENST00000523298	ADAMTS7	Q9UKP4	1686 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	KDM6A	O15550	1401 aa	Predicted RBP	3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	NAV1	Q8NEY1	1877 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	YLPM1	P49750	1951 aa	Known RBP	3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	QSER1	Q2KHR3	1735 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	PRORSD1P	A6NEY8	169 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	GJE1	A6NN92	205 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	TRDC	B7Z8K6	153 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	ANKRD63	C9JTQ0	380 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	PPP5D1	E7EU14	171 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	GPR31	O00270	319 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	PLPP1	O14494	284 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	PLIN3	O60664	434 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	SLC16A7	O60669	478 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	ENTPD6	O75354	484 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	DCTN3	O75935	186 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	HAND1	O96004	215 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	MT-CO2	P00403	227 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	OR10J4	P0C629	311 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	LIMS3	P0CW19	117 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	LIMS4	P0CW20	117 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	IFI30	P13284	250 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	VDAC1	P21796	283 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	F2R	P25116	425 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	PAX6	P26367	422 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	LOX	P28300	417 aa	Predicted RBP	3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	GCA	P28676	217 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	NTS	P30990	170 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	S100A7	P31151	101 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	SDC4	P31431	198 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	AKR1C3	P42330	323 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	RPL35	P42766	123 aa	Known RBP	3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	KIR2DS4	P43632	304 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	MAP2K4	P45985	399 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	EIF2B2	P49770	351 aa	Known RBP	3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	RBP2	P50120	134 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	RIPPLY3	P57055	190 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	RPS14	P62263	151 aa	Known RBP	3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	SLC7A9	P82251	487 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	RAB40B	Q12829	278 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	OR2F1	Q13607	317 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	TRAM1	Q15629	374 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	TSN	Q15631	228 aa	Known RBP	3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	SMIM5	Q71RC9	77 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	GALNT10	Q86SR1	603 aa		3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	MRPL52	Q86TS9	123 aa	Known RBP	3.2	□□□□□ -1.9
CTNNA1-238	ENST00000523298	SLC35F2	Q8IXU6	374 aa		3.2	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms