RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 LRRC75BQ2VPJ9 315 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 LINC01590Q5TEZ4 76 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 OTPQ5XKR4 325 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 C10orf99Q6UWK7 81 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 ANKRD13BQ86YJ7 626 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 STX19Q8N4C7 294 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 GCSAMQ8N6F7 178 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 Q8NFD4 153 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 OR52I1Q8NGK6 324 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 ST8SIA4Q92187 359 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 LGALS12Q96DT0 336 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 ERMAPQ96PL5 475 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 RCHY1Q96PM5 261 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 PRR25Q96S07 402 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 MYCBPQ99417 103 aaPredicted RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 DCTN5Q9BTE1 182 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 SEPSECSQ9HD40 501 aaKnown RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 AMBNQ9NP70 447 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 PALMDQ9NP74 551 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 TUBG2Q9NRH3 451 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 INIPQ9NRY2 104 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 KAAG1Q9UBP8 84 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 GRHPRQ9UBQ7 328 aa5.28□□□□□ -1.56
SDCBP-210ENST00000522843 EXOSC1Q9Y3B2 195 aaKnown RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 DYNC1H1Q14204 4646 aaKnown RBP5.28□□□□□ -1.56
SDCBP-210ENST00000522843 IGHV3OR15-7A0A075B7D8 119 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 PRSS37A4D1T9 235 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 CCDC182A6NF36 153 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 OOEPA6NGQ2 149 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 SYNGR1O43759 233 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 GLCEO94923 617 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 PTBP3O95758 552 aaKnown RBP5.27□□□□□ -1.57
SDCBP-210ENST00000522843 HNRNPCP07910 306 aaKnown RBP eCLIP5.27□□□□□ -1.57
SDCBP-210ENST00000522843 OR2T7P0C7T2 308 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 LIMS3P0CW19 117 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 LIMS4P0CW20 117 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 SELLP14151 372 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 IRF2P14316 349 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 RGS6P49758 472 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 RAB13P51153 203 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 ZNF134P52741 427 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 BLCAPP62952 87 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 BDH1Q02338 343 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.27□□□□□ -1.57
SDCBP-210ENST00000522843 TPBGQ13641 420 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 CRMP1Q14194 572 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 AANATQ16613 207 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 PCK2Q16822 640 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 TEX30Q5JUR7 227 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 PLBD1Q6P4A8 553 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 ZNF826PQ6ZT77 177 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 AHSA2Q719I0 299 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 ZNF367Q7RTV3 350 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 NANOGNBQ7Z5D8 188 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 BCDIN3DQ7Z5W3 292 aaKnown RBP5.27□□□□□ -1.57
SDCBP-210ENST00000522843 KCTD20Q7Z5Y7 419 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 GPR141Q7Z602 305 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 SATL1Q86VE3 508 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 SBSPONQ8IVN8 264 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 DYNAPQ8N1N2 210 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 ACBD7Q8N6N7 88 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 FAM216BQ8N7L0 139 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 OR5AU1Q8NGC0 362 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 OR51G2Q8NGK0 314 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 OR11L1Q8NGX0 322 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 OR2T27Q8NH04 317 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 OR4K13Q8NH42 304 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 OR52N1Q8NH53 320 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 FNDC8Q8TC99 324 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 ERGIC1Q969X5 290 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 YIPF6Q96EC8 236 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 RNFT2Q96EX2 444 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 Q96M85 177 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 ALG12Q9BV10 488 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 WDR76Q9H967 626 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 RAB18Q9NP72 206 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 TRIM36Q9NQ86 728 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 POLE4Q9NR33 117 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 TMEM100Q9NV29 134 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 DNAJC27Q9NZQ0 273 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 ERGIC3Q9Y282 383 aa5.27□□□□□ -1.57
SDCBP-210ENST00000522843 TRAV38-1A0A0B4J264 116 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 A0A1W2PRG6 482 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 A6NDX4 124 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 OR6C6A6NF89 314 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-210ENST00000522843 J3KRW8 73 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 M0R129 80 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 NDUFA2O43678 99 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 DOK2O60496 412 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 SPI1P17947 270 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 MSR1P21757 451 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 GALP22466 123 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 ANOS1P23352 680 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 CHATP28329 748 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 CRABP1P29762 137 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 DAP3P51398 398 aaKnown RBP5.26□□□□□ -1.57
SDCBP-210ENST00000522843 GTF2A1P52655 376 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-210ENST00000522843 ACTC1P68032 377 aa5.26□□□□□ -1.57
SDCBP-210ENST00000522843 ACTA1P68133 377 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms