RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 DEFB108BQ8NET1 73 aa17.95■□□□□ 0.46
R3HCC1-208ENST00000522012 OR52I2Q8NH67 350 aa17.95■□□□□ 0.46
R3HCC1-208ENST00000522012 THAP7Q9BT49 309 aaPredicted RBP17.95■□□□□ 0.46
R3HCC1-208ENST00000522012 ROS1P08922 2347 aa17.95■□□□□ 0.46
R3HCC1-208ENST00000522012 OR2AT4A6NND4 320 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 LYNX1G3V0Z9 82 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 GABARAPH6UMI1 98 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 SIRPB1O00241 398 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 HSPB6O14558 160 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 UPK1BO75841 260 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 OR2H2O95918 312 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 CD3GP09693 182 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 CSF3P09919 207 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 LYNX1P0DP58 116 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 COL8A2P25067 703 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 GNG2P59768 71 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 HACD4Q5VWC8 232 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 SMIM4Q8WVI0 70 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 C14orf79Q96F83 325 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 SULT4A1Q9BR01 284 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 SPACA1Q9HBV2 294 aa17.94■□□□□ 0.46
R3HCC1-208ENST00000522012 UBE2QL1A1L167 161 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 GSTZ1O43708 216 aaPredicted RBP17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 LY6HO94772 140 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 TFF1P04155 84 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 MELTFP08582 738 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 PSG2P11465 335 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 IL7P13232 177 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 ARFRP1Q13795 201 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 PNLIPRP3Q17RR3 467 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 MICBQ29980 383 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 TRIQKQ629K1 86 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 SUMF2Q8NBJ7 301 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 NUDCD2Q8WVJ2 157 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 ST8SIA4Q92187 359 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 RDH5Q92781 318 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 YIPF5Q969M3 257 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 CCL19Q99731 98 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 IFT22Q9H7X7 185 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 RCC2Q9P258 522 aaKnown RBP17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 ICE1Q9Y2F5 2266 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 TRAV24A0A0B4J272 114 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 MEIS3P1A6NDR6 274 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 OOEPA6NGQ2 149 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 SERPINE3A8MV23 424 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 MCRIP1C9JLW8 97 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 DAOP14920 347 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 PRDX2P32119 198 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 GABRA2P47869 451 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 BPIFB2Q8N4F0 458 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 NEK7Q8TDX7 302 aa17.93■□□□□ 0.46
R3HCC1-208ENST00000522012 IGKV1D-17A0A075B6S4 117 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 PPIAL4EA0A075B759 164 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 PPIAL4DF5H284 164 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 OVOL3O00110 214 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 LANCL1O43813 399 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 LPLP06858 475 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 PPIAL4FP0DN26 164 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 INPP1P49441 399 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 IFITM3Q01628 133 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 TRAPPC6BQ86SZ2 158 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 CD177Q8N6Q3 437 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 DPCDQ9BVM2 203 aaPredicted RBP17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 SCPEP1Q9HB40 452 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 DLL4Q9NR61 685 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 KLK11Q9UBX7 282 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 AK3Q9UIJ7 227 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 PLEKHA6Q9Y2H5 1048 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 PPIAL4AQ9Y536 164 aa17.92■□□□□ 0.46
R3HCC1-208ENST00000522012 LRRK2Q5S007 2527 aa17.91■□□□□ 0.46
R3HCC1-208ENST00000522012 LGALS8O00214 317 aa17.91■□□□□ 0.46
R3HCC1-208ENST00000522012 SULT1C2O00338 296 aa17.91■□□□□ 0.46
R3HCC1-208ENST00000522012 SLC33A1O00400 549 aaPredicted RBP17.91■□□□□ 0.46
R3HCC1-208ENST00000522012 MUC1P15941 1255 aaPredicted RBP17.91■□□□□ 0.46
R3HCC1-208ENST00000522012 MRPS15P82914 257 aaKnown RBP17.91■□□□□ 0.46
R3HCC1-208ENST00000522012 COL10A1Q03692 680 aa17.91■□□□□ 0.46
R3HCC1-208ENST00000522012 PAN3Q58A45 887 aaKnown RBP17.91■□□□□ 0.46
R3HCC1-208ENST00000522012 TEX36Q5VZQ5 186 aa17.91■□□□□ 0.46
R3HCC1-208ENST00000522012 DCDC5Q6ZRR9 648 aa17.91■□□□□ 0.46
R3HCC1-208ENST00000522012 GPX8Q8TED1 209 aa17.91■□□□□ 0.46
R3HCC1-208ENST00000522012 ZFAND2BQ8WV99 257 aa17.91■□□□□ 0.46
R3HCC1-208ENST00000522012 DYRK2Q92630 601 aa17.91■□□□□ 0.46
R3HCC1-208ENST00000522012 ABCA4P78363 2273 aa17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 TRAV38-1A0A0B4J264 116 aa17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 A0A1W2PQ09 198 aa17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 ORC5O43913 435 aa17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 SSX5O60225 188 aa17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 NDUFS7O75251 213 aa17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 RBBP9O75884 186 aa17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 F12P00748 615 aaPredicted RBP17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 GYPAP02724 150 aa17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 FCER2P06734 321 aa17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 MRPS11P82912 194 aaKnown RBP17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 RBM39Q14498 530 aaKnown RBP17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 STEAP3Q658P3 488 aa17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 DNM1P46Q6ZS02 220 aa17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 CMSS1Q9BQ75 279 aaKnown RBP17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 LIME1Q9H400 295 aa17.9■□□□□ 0.46
R3HCC1-208ENST00000522012 PALMDQ9NP74 551 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms