RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 CAPZA1P52907 286 aa7.77□□□□□ -1.17
CLK4-209ENST00000521621 HOXA4Q00056 320 aaPredicted RBP7.77□□□□□ -1.17
CLK4-209ENST00000521621 GPR157Q5UAW9 335 aa7.77□□□□□ -1.17
CLK4-209ENST00000521621 IL17RELQ6ZVW7 336 aa7.77□□□□□ -1.17
CLK4-209ENST00000521621 GAPTQ8N292 157 aa7.77□□□□□ -1.17
CLK4-209ENST00000521621 OR52N4Q8NGI2 321 aa7.77□□□□□ -1.17
CLK4-209ENST00000521621 SNTG1Q9NSN8 517 aa7.77□□□□□ -1.17
CLK4-209ENST00000521621 A0A087X0M5 115 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 A0A1B0GX30 115 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 hADV38S2A0JD32 116 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 RNASE1P07998 156 aaKnown RBP7.76□□□□□ -1.17
CLK4-209ENST00000521621 OCMP0CE72 109 aaPredicted RBP7.76□□□□□ -1.17
CLK4-209ENST00000521621 CD34P28906 385 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 GABRA2P47869 451 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 OR3A1P47881 315 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 TMEM30BQ3MIR4 351 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 DDI2Q5TDH0 399 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 TMEM200BQ69YZ2 307 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 Q6YL49 198 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 VMO1Q7Z5L0 202 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 LRRTM1Q86UE6 522 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 BPIFB2Q8N4F0 458 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 ZNRF1Q8ND25 227 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 OR5T2Q8NGG2 359 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 OR5M11Q96RB7 305 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 RBFOX1Q9NWB1 397 aaKnown RBP7.76□□□□□ -1.17
CLK4-209ENST00000521621 RCC2Q9P258 522 aaKnown RBP7.76□□□□□ -1.17
CLK4-209ENST00000521621 ZNF69Q9UC07 566 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 PTGES3LE9PB15 166 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 RRP9O43818 475 aaKnown RBP7.76□□□□□ -1.17
CLK4-209ENST00000521621 TMEM127O75204 238 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 SFTPBP07988 381 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 PRKACAP17612 351 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 ERVFRD-1P60508 538 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 ACSM3Q53FZ2 586 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 HCP5Q6MZN7 132 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 TMEM185AQ8NFB2 350 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 OR11H6Q8NGC7 330 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 CNBD2Q96M20 576 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 C1orf147Q96MC9 270 aaPredicted RBP7.76□□□□□ -1.17
CLK4-209ENST00000521621 OR14A2Q96R54 314 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 SPACA1Q9HBV2 294 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 NDUFB11Q9NX14 153 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 TBL2Q9Y4P3 447 aaKnown RBP7.76□□□□□ -1.17
CLK4-209ENST00000521621 A0A0G2JK05 382 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 TMEM89A2RUT3 159 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 SLC33A1O00400 549 aaPredicted RBP7.76□□□□□ -1.17
CLK4-209ENST00000521621 SPRY1O43609 319 aaPredicted RBP7.76□□□□□ -1.17
CLK4-209ENST00000521621 ARL6IP5O75915 188 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 OR2H2O95918 312 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 IGHV4-38-2P0DP08 117 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 TMEM225BP0DP42 221 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 POU3F4P49335 361 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 PSMD7P51665 324 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 GP2P55259 537 aaKnown RBP7.76□□□□□ -1.17
CLK4-209ENST00000521621 P2RX3P56373 397 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 RPL31P62899 125 aaKnown RBP7.76□□□□□ -1.17
CLK4-209ENST00000521621 IKZF1Q13422 519 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 Q3ZCU0 254 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 RTN4RL2Q86UN3 420 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 PHC2Q8IXK0 858 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 ZDHHC22Q8N966 263 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 TNFAIP8L1Q8WVP5 186 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 MEGF9Q9H1U4 602 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 HEXA-AS1Q9H8Q6 139 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 C19orf12Q9NSK7 152 aa7.76□□□□□ -1.17
CLK4-209ENST00000521621 TRAV8-7A0A075B6U6 113 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 TRAV1-2A0A0B4J238 106 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 CA11O75493 328 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 RGS9O75916 674 aaPredicted RBP7.75□□□□□ -1.17
CLK4-209ENST00000521621 CGB3P0DN86 165 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 CGB7P0DN87 165 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 NDUFB7P17568 137 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 SOX2P48431 317 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 RBM11P57052 281 aaKnown RBP7.75□□□□□ -1.17
CLK4-209ENST00000521621 GDPD3Q7L5L3 318 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 OSR2Q8N2R0 312 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 MGLLQ99685 303 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 SLC6A7Q99884 636 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 MS4A7Q9GZW8 240 aaPredicted RBP7.75□□□□□ -1.17
CLK4-209ENST00000521621 ODF3BA8MYP8 253 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 SLC22A1O15245 554 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 VENTXO95231 258 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 SELLP14151 372 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 DYNLT3P51808 116 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 UBA52P62987 128 aaKnown RBP7.75□□□□□ -1.17
CLK4-209ENST00000521621 RSU1Q15404 277 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 MED22Q15528 200 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 ZNF773Q6PK81 442 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 TMEM91Q6ZNR0 172 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 LIAT1Q6ZQX7 453 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 TCF23Q7RTU1 214 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 ZNF554Q86TJ5 538 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 C8orf31Q8N9H6 132 aa7.75□□□□□ -1.17
CLK4-209ENST00000521621 ZNF48Q96MX3 618 aaPredicted RBP7.75□□□□□ -1.17
CLK4-209ENST00000521621 TRAV40A0A0B4J280 105 aa7.74□□□□□ -1.17
CLK4-209ENST00000521621 TRDV1A0A1B0GX56 115 aa7.74□□□□□ -1.17
CLK4-209ENST00000521621 TRIM64CA6NLI5 447 aa7.74□□□□□ -1.17
CLK4-209ENST00000521621 RNASEK-C17orf49H0YIS7 233 aa7.74□□□□□ -1.17
CLK4-209ENST00000521621 PSPNO60542 156 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms