RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 SHARPINQ9H0F6 387 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 HIPK2Q9H2X6 1198 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 MMP26Q9NRE1 261 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 PSENENQ9NZ42 101 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 ZNF407Q9C0G0 2248 aa10.29□□□□□ -0.76
SYNPO-204ENST00000519664 TGOLN2O43493 480 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 MAGEA5P43359 124 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 MZT1Q08AG7 82 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 SPINK9Q5DT21 86 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 RGS7BPQ6MZT1 257 aaPredicted RBP10.28□□□□□ -0.76
SYNPO-204ENST00000519664 ZADH2Q8N4Q0 377 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 TVP23CQ96ET8 276 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 CDX2Q99626 313 aaPredicted RBP10.28□□□□□ -0.76
SYNPO-204ENST00000519664 BMP5P22003 454 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 PSMB3P49720 205 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 GNG3P63215 75 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 CEBPEQ15744 281 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 MPPED2Q15777 294 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 C19orf48Q6RUI8 117 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 WNT2BQ93097 391 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 SCARF2Q96GP6 870 aaPredicted RBP10.28□□□□□ -0.76
SYNPO-204ENST00000519664 GPHA2Q96T91 129 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 SAMD10Q9BYL1 202 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 TMEM9BQ9NQ34 198 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 IGLV1-36A0A0B4J1U3 117 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 IGHV3-43A0A0B4J1X8 118 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 CLEC18AA5D8T8 446 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 AQP7P3A6NL99 342 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 FIGNL2A6NMB9 653 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 A8MXE2 369 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 M0R1B8 84 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 EFEMP2O95967 443 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 IL2RAP01589 272 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 IGHV3-43DP0DP04 118 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 TMEM267Q0VDI3 215 aaPredicted RBP10.28□□□□□ -0.76
SYNPO-204ENST00000519664 GUK1Q16774 197 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 CLEC18CQ8NCF0 446 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 CA5BP1Q8WTZ4 195 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 CT55Q8WUE5 264 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 MEGF10Q96KG7 1140 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 MPTX1A8MV57 137 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 MS4A18H0YCH9 400 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 GPR37O15354 613 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 MT-CO3P00414 261 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 CST4P01036 141 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 ACKR3P25106 362 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 GSK3AP49840 483 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 H2BFSP57053 126 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 MS4A18Q3C1V0 323 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 LYZL2Q7Z4W2 148 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 C17orf78Q8N4C9 275 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 LFNGQ8NES3 379 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 C22orf15Q8WYQ4 148 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 ISOC2Q96AB3 205 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 GNPNAT1Q96EK6 184 aaPredicted RBP10.28□□□□□ -0.76
SYNPO-204ENST00000519664 AMDHD2Q9Y303 409 aa10.28□□□□□ -0.76
SYNPO-204ENST00000519664 A0A0G2JMZ2 1700 aa10.27□□□□□ -0.76
SYNPO-204ENST00000519664 LRRC37A2A6NM11 1700 aa10.27□□□□□ -0.76
SYNPO-204ENST00000519664 PDGFBP01127 241 aaPredicted RBP10.27□□□□□ -0.76
SYNPO-204ENST00000519664 METTL15P1P0C7V9 234 aa10.27□□□□□ -0.76
SYNPO-204ENST00000519664 MEOX1P50221 254 aa10.27□□□□□ -0.76
SYNPO-204ENST00000519664 PRSS54Q6PEW0 395 aa10.27□□□□□ -0.76
SYNPO-204ENST00000519664 SLC25A42Q86VD7 318 aa10.27□□□□□ -0.76
SYNPO-204ENST00000519664 CARFQ8N187 725 aa10.27□□□□□ -0.76
SYNPO-204ENST00000519664 SLC39A7Q92504 469 aa10.27□□□□□ -0.76
SYNPO-204ENST00000519664 ERGIC1Q969X5 290 aa10.27□□□□□ -0.76
SYNPO-204ENST00000519664 PRO1933Q9H354 126 aa10.27□□□□□ -0.76
SYNPO-204ENST00000519664 CDRT15L2A8MXV6 281 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 GPR12P47775 334 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 UBE2G2P60604 165 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 DMWDQ09019 674 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 RNF151Q2KHN1 245 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 LAMTOR1Q6IAA8 161 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 JMJD6Q6NYC1 403 aaPredicted RBP10.27□□□□□ -0.77
SYNPO-204ENST00000519664 OR10P1Q8NGE3 313 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 OR4F5Q8NH21 305 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 OR4F4Q96R69 305 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 DCAF16Q9NXF7 216 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 TCF20Q9UGU0 1960 aaKnown RBP10.27□□□□□ -0.77
SYNPO-204ENST00000519664 LINC00587B1AMM8 73 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 RAMP1O60894 148 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 ZNF787Q6DD87 383 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 C1orf87Q8N0U7 546 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 FAM58AQ8N1B3 248 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 FAM24BQ8N5W8 94 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 OR11L1Q8NGX0 322 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 RPS4Y2Q8TD47 263 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 RGP1Q92546 391 aaPredicted RBP10.27□□□□□ -0.77
SYNPO-204ENST00000519664 ADGRG7Q96K78 797 aa10.27□□□□□ -0.77
SYNPO-204ENST00000519664 TRBV5-5A0A0J9YX44 114 aa10.26□□□□□ -0.77
SYNPO-204ENST00000519664 LOC101059948A0A1B0GTJ6 334 aa10.26□□□□□ -0.77
SYNPO-204ENST00000519664 A0A1W2PQM1 296 aa10.26□□□□□ -0.77
SYNPO-204ENST00000519664 SPRY3O43610 288 aa10.26□□□□□ -0.77
SYNPO-204ENST00000519664 CEACAM6P40199 344 aa10.26□□□□□ -0.77
SYNPO-204ENST00000519664 TMEM41BQ5BJD5 291 aa10.26□□□□□ -0.77
SYNPO-204ENST00000519664 WFDC8Q8IUA0 241 aa10.26□□□□□ -0.77
SYNPO-204ENST00000519664 SARAFQ96BY9 339 aa10.26□□□□□ -0.77
SYNPO-204ENST00000519664 ZNF488Q96MN9 340 aa10.26□□□□□ -0.77
SYNPO-204ENST00000519664 SEC11CQ9BY50 192 aa10.26□□□□□ -0.77
SYNPO-204ENST00000519664 RASL12Q9NYN1 266 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms