RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ETV1P50549 477 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 SLC35A2P78381 396 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 IFFO1Q0D2I5 559 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 TRDNQ13061 729 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 MEP1BQ16820 701 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 PRNTQ86SH4 94 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 LHFPL1Q86WI0 220 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 PDIK1LQ8N165 341 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 CCDC89Q8N998 374 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 FAM83FQ8NEG4 500 aaPredicted RBP-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 CXorf40AQ8TE69 158 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 THRSPQ92748 146 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 MEAF6Q9HAF1 191 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 STX8Q9UNK0 236 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 GOLT1BQ9Y3E0 138 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 FAM215AQ9Y5M1 114 aa-3.05□□□□□ -2.9
RNU6-539P-201ENST00000516665 HMSDA8MTL9 139 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 MPZL2O60487 215 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 OR2J3O76001 311 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 CXCL10P02778 98 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 NQO1P15559 274 aaKnown RBP-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 IFNAR1P17181 557 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 FUT1P19526 365 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 TSPOP30536 169 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 NME5P56597 212 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 CLDN6P56747 220 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 TMEM220Q6QAJ8 160 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 FAM43BQ6ZT52 329 aaPredicted RBP-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 GABRG1Q8N1C3 465 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 RHEBL1Q8TAI7 183 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 TONSLQ96HA7 1378 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 PKNOX2Q96KN3 472 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 C7orf34Q96L11 122 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 IMUPQ9GZP8 106 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 RGS18Q9NS28 235 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 RBM22Q9NW64 420 aaKnown RBP eCLIP-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 OR5AC2Q9NZP5 309 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 POLDIP2Q9Y2S7 368 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 ZNF706Q9Y5V0 76 aaPredicted RBP-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 FAT3Q8TDW7 4589 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 AKAP13Q12802 2813 aa-3.06□□□□□ -2.9
RNU6-539P-201ENST00000516665 PHRF1Q9P1Y6 1649 aaKnown RBP-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 TMEM235A6NFC5 223 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 SLC17A3O00476 420 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 GOSR2O14653 212 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 DNAJB6O75190 326 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 B3GALNT1O75752 331 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 GFPT2O94808 682 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 GYPCP04921 128 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 CCR1P32246 355 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 HSPA1LP34931 641 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 NAPAP54920 295 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 CDH6P55285 790 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 ADIGQ0VDE8 80 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 DEFB109BQ30KR1 87 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 NIPAL3Q6P499 406 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 KDELC1Q6UW63 502 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 CATSPER4Q7RTX7 472 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 ERASQ7Z444 233 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 CYP4Z1Q86W10 505 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 SLC38A6Q8IZM9 456 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 CBR4Q8N4T8 237 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 OR8J1Q8NGP2 316 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 FIBINQ8TAL6 211 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 TBX5Q99593 518 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 PRSS27Q9BQR3 290 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 ACTR3CQ9C0K3 210 aaPredicted RBP-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 TMEM231Q9H6L2 316 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 DNAJB9Q9UBS3 223 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 N6AMT1Q9Y5N5 214 aa-3.07□□□□□ -2.9
RNU6-539P-201ENST00000516665 C2CD3Q4AC94 2353 aa-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 A0A087WSZ3 146 aa-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 IBA57-AS1B1ANH7 110 aa-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 PHYHO14832 338 aa-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 GABRA6Q16445 453 aa-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 ZCWPW2Q504Y3 356 aa-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 CHCHD2P9Q5T1J5 151 aaPredicted RBP-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 METTL23Q86XA0 190 aa-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 SYCP3Q8IZU3 236 aa-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 BPIFCQ8NFQ6 507 aa-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 CMBLQ96DG6 245 aa-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 NRBF2Q96F24 287 aa-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 MRPL48Q96GC5 212 aaKnown RBP-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 OR5B12Q96R08 314 aa-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 SRRQ9GZT4 340 aa-3.08□□□□□ -2.9
RNU6-539P-201ENST00000516665 PLECQ15149 4684 aaKnown RBP-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 BTN3A3O00478 584 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 POLR2DO15514 142 aaKnown RBP-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 TCF21O43680 179 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 OR1F1O43749 312 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 EEDO75530 441 aaKnown RBP-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 CLPXO76031 633 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 MBD3O95983 291 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 SERPINA3P01011 423 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 HSP90AB1P08238 724 aaKnown RBP-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 OR4A8P0C604 315 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 OR4Q2P0C623 313 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 DNAJB1P25685 340 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 MIPP30301 263 aa-3.09□□□□□ -2.9
RNU6-539P-201ENST00000516665 CNBPP62633 177 aaKnown RBP-3.09□□□□□ -2.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms