RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 BRCA1P38398 1863 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 RIMS1Q86UR5 1692 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CAMTA1Q9Y6Y1 1673 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 GRIN2BQ13224 1484 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF518AQ6AHZ1 1483 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ARAP1Q96P48 1450 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGLV8-61A0A075B6I0 122 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 A0A087WWV3 80 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 TRAV8-6A0A0B4J262 113 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV1-69DA0A0B4J2H0 117 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV3-16A0A0C4DH30 117 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 A0A0G2JN53 185 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 A0A0J9YXV3 536 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 LOC389332A0A1B0GUA5 103 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 A0A1B0GXF2 115 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MYBPHLA2RUH7 354 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 C5orf49A4QMS7 147 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 GMNCA6NCL1 334 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 RBMY1BA6NDE4 496 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PGPA6NDG6 321 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 RBMY1EA6NEQ0 496 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PRORSD1PA6NEY8 169 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CD300LBA8K4G0 201 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 A8MXK9 166 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MIF4GDA9UHW6 222 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF878C9JN71 531 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 E7EQ34 232 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 F5H5P2 479 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 H7C1H1 209 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 H7C417 338 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 K7N7A8 449 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 M0QZK8 103 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 GPR31O00270 319 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SAP18O00422 153 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MANBAO00462 879 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC17A3O00476 420 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 LAD1O00515 517 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAAHO00519 579 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MFNGO00587 321 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PEX7O00628 323 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 KPNA4O00629 521 aaPredicted RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 BHLHE40O14503 412 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 KMOO15229 486 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 NDUFA2O43678 99 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC37A4O43826 429 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 NDUFS5O43920 106 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 COX7A2P2O60397 106 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SNAP91O60641 907 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 GALR3O60755 368 aaPredicted RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 NPIPB7O75200 414 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SMIM24O75264 130 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF780AO75290 641 aaPredicted RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PDCD6O75340 191 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 RDH16O75452 317 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SERPINB7O75635 380 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 RP2O75695 350 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MMP23AO75900 390 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SERF1AO75920 110 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR7C1O76099 320 aaPredicted RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 KBTBD11O94819 623 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 S1PR2O95136 353 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 DUSP14O95147 198 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 TRBV12-3P01733 135 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV3-48P01763 117 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHG2P01859 326 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 TTRP02766 147 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 BGLAPP02818 100 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CD5P06127 495 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 EIF4EP06730 217 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CRYGDP07320 174 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 IL3P08700 152 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CSF3P09919 207 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR4A8P0C604 315 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR4Q2P0C623 313 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10J4P0C629 311 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR8U8P0C7N1 319 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 RBMY1DP0C7P1 496 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CHTF8P0CG12 524 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 RBMY1A1P0DJD3 496 aaKnown RBP0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SCGB1C2P0DMR2 95 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 C1GALT1C1LP0DN25 315 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR13C7P0DN81 318 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR12D1P0DN82 309 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 IGHV3-43DP0DP04 118 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 TDGF1P13385 188 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CYBAP13498 195 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ICAM2P13598 275 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PGAM2P15259 253 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 SPNP16150 400 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 KLK2P20151 261 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 OMGP23515 440 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 PRTN3P24158 256 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 COX7A1P24310 79 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 GADD45AP24522 165 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 MARK3P27448 753 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 ELK4P28324 431 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CD34P28906 385 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CRABP2P29373 138 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 S100GP29377 79 aa0.44□□□□□ -2.34
RNU4-54P-201ENST00000516428 CRABP1P29762 137 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms