RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 TPRX1Q8N7U7 411 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 OR4S1Q8NGB4 309 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 OR52N4Q8NGI2 321 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 OR51A4Q8NGJ6 313 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 OR10AC1Q8NH08 325 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 OR5AK2Q8NH90 309 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 FAM110DQ8TAY7 271 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-215ENST00000515516 NDNFQ8TB73 568 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 HAVCR2Q8TDQ0 301 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 TSEN15Q8WW01 171 aaKnown RBP11.07□□□□□ -0.64
TCOF1-215ENST00000515516 CPNE2Q96FN4 548 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-215ENST00000515516 GAL3ST2Q9H3Q3 398 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 AMBNQ9NP70 447 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 DHDHQ9UQ10 334 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 SIGLEC9Q9Y336 463 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 UBE2J1Q9Y385 318 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-215ENST00000515516 MINOS1-NBL1R4GNA1 71 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 TRRAPQ9Y4A5 3859 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 TRGV10A0A0A0MS01 117 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 ODF3BA8MYP8 253 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 F2RL2O00254 374 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 PSPNO60542 156 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 KDM4BO94953 1096 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 OR2H2O95918 312 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 TMEM225BP0DP42 221 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 ZNF44P15621 663 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 GABRB1P18505 474 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 RAB13P51153 203 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 OR52W1Q6IF63 320 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 SAXO1Q8IYX7 474 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 OR5D18Q8NGL1 313 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 SPACA5Q96QH8 159 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 SLC29A1Q99808 456 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 CLEC7AQ9BXN2 247 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 TMEM133Q9H2Q1 129 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 ISG20L2Q9H9L3 353 aaKnown RBP11.06□□□□□ -0.64
TCOF1-215ENST00000515516 FAM118AQ9NWS6 357 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 ERVK13-1Q9NX77 482 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 TCF19Q9Y242 345 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 MYRFQ9Y2G1 1151 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 HILPDAQ9Y5L2 63 aa11.06□□□□□ -0.64
TCOF1-215ENST00000515516 IGHV2-26A0A0B4J1V2 119 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 DEGS1O15121 323 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 SULT1B1O43704 296 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 PEX14O75381 377 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 ALX3O95076 343 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 VSIG10L2P0DP72 767 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 OR3A1P47881 315 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 EFNB2P52799 333 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 SLC34A1Q06495 639 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 IL18R1Q13478 541 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 ARSJQ5FYB0 599 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-215ENST00000515516 CRIP3Q6Q6R5 217 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 KLHDC1Q8N7A1 406 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 CHST4Q8NCG5 386 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 OR52I1Q8NGK6 324 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 PIFOQ8TCI5 191 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 STMN2Q93045 179 aa11.05□□□□□ -0.64
TCOF1-215ENST00000515516 IGKV1-12A0A0C4DH73 117 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 CHST1O43916 411 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 ZFPL1O95159 310 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 TSPAN15O95858 294 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 IGKV1D-12P01611 117 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 RAB3AP20336 220 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 LMO1P25800 156 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 HTR1DP28221 377 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 ARHGDIBP52566 201 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 AESQ08117 197 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 KISS1Q15726 138 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 PDLIM3Q53GG5 364 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-215ENST00000515516 LPCAT4Q643R3 524 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 TMPRSS11AQ6ZMR5 421 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 TCF23Q7RTU1 214 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 RTN4RL2Q86UN3 420 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 SATL1Q86VE3 508 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 DYNAPQ8N1N2 210 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 ABHD12Q8N2K0 398 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 CAPSLQ8WWF8 208 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 GPER1Q99527 375 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 PRSS22Q9GZN4 317 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 MRPS18AQ9NVS2 196 aaKnown RBP11.04□□□□□ -0.64
TCOF1-215ENST00000515516 ING3Q9NXR8 418 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 TAS2R3Q9NYW6 316 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 FOXJ3Q9UPW0 622 aa11.04□□□□□ -0.64
TCOF1-215ENST00000515516 A0A0G2JK05 382 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 IRGMA1A4Y4 181 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 A6NDX4 124 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 E9PI62 339 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 TOR1AO14656 332 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 CD2P06729 351 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 CDK2P24941 298 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 MTNR1BP49286 362 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 DYNLT3P51808 116 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 KRBOX4Q5JUW0 171 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 ZNF691Q5VV52 312 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 TMEM219Q86XT9 240 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 PARP16Q8N5Y8 322 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 C11orf44Q8N8P7 122 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 OR4D6Q8NGJ1 314 aa11.03□□□□□ -0.64
TCOF1-215ENST00000515516 ZNF596Q8TC21 504 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms