RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 BMXP51813 675 aa11.49□□□□□ -0.57
USP46-209ENST00000514536 RPL31P62899 125 aaKnown RBP11.49□□□□□ -0.57
USP46-209ENST00000514536 SSX1Q16384 188 aa11.49□□□□□ -0.57
USP46-209ENST00000514536 Q6P435 159 aa11.49□□□□□ -0.57
USP46-209ENST00000514536 ZNF773Q6PK81 442 aa11.49□□□□□ -0.57
USP46-209ENST00000514536 CMTM4Q8IZR5 234 aa11.49□□□□□ -0.57
USP46-209ENST00000514536 OR5D13Q8NGL4 314 aa11.49□□□□□ -0.57
USP46-209ENST00000514536 MUL1Q969V5 352 aa11.49□□□□□ -0.57
USP46-209ENST00000514536 CHST6Q9GZX3 395 aa11.49□□□□□ -0.57
USP46-209ENST00000514536 KPTNQ9Y664 436 aa11.49□□□□□ -0.57
USP46-209ENST00000514536 FBN1P35555 2871 aaKnown RBP11.48□□□□□ -0.57
USP46-209ENST00000514536 TRBV23-1A0A0A0MS06 115 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 TRAV40A0A0B4J280 105 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 DEGS1O15121 323 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 RGS9O75916 674 aaPredicted RBP11.48□□□□□ -0.57
USP46-209ENST00000514536 CSTBP04080 98 aaKnown RBP11.48□□□□□ -0.57
USP46-209ENST00000514536 UCHL1P09936 223 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 ZNF44P15621 663 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 FPR2P25090 351 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 PSMA1P25786 263 aaKnown RBP11.48□□□□□ -0.57
USP46-209ENST00000514536 GABRA5P31644 462 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 EDDM3BP56851 147 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 FABP5Q01469 135 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 SCGB2A2Q13296 93 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 GRK1Q15835 563 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 HSD17B12Q53GQ0 312 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 UBE2UQ5VVX9 321 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 TMEM200BQ69YZ2 307 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 GDPD3Q7L5L3 318 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 LRRTM1Q86UE6 522 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 CDH26Q8IXH8 852 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 BCL6BQ8N143 479 aaPredicted RBP11.48□□□□□ -0.57
USP46-209ENST00000514536 OR8H2Q8N162 312 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 OR4S1Q8NGB4 309 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 LHX4Q969G2 390 aa11.48□□□□□ -0.57
USP46-209ENST00000514536 MS4A7Q9GZW8 240 aaPredicted RBP11.48□□□□□ -0.57
USP46-209ENST00000514536 A0A0G2JK05 382 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 SERPINA2P20848 420 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 LMO1P25800 156 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 PSMB9P28065 219 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 PRB3Q04118 309 aaPredicted RBP11.47□□□□□ -0.57
USP46-209ENST00000514536 EDDM3AQ14507 147 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 PIGYQ3MUY2 71 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 KCTD21Q4G0X4 260 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 SLC22A6Q4U2R8 563 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 GLIPR1L1Q6UWM5 242 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 VMO1Q7Z5L0 202 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 LYPD6Q86Y78 171 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 BPIFB2Q8N4F0 458 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 KIR3DL3Q8N743 410 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 Q8N7P7 452 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 NKAIN3Q8N8D7 197 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 Q8NFD4 153 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 OR4D6Q8NGJ1 314 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 OR51T1Q8NGJ9 327 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 PHYHIPQ92561 330 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 FCGR1BQ92637 280 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 SLC6A7Q99884 636 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 IL36GQ9NZH8 169 aa11.47□□□□□ -0.57
USP46-209ENST00000514536 MRPS28Q9Y2Q9 187 aaKnown RBP11.47□□□□□ -0.57
USP46-209ENST00000514536 SOX21Q9Y651 276 aaPredicted RBP11.47□□□□□ -0.57
USP46-209ENST00000514536 CENPVL3A0A0U1RRI6 287 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 A0A1W2PP11 408 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 MEX3AA1L020 520 aaKnown RBP11.46□□□□□ -0.57
USP46-209ENST00000514536 OR3A1P47881 315 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 DLX1P56177 255 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 SRSF2Q01130 221 aaKnown RBP11.46□□□□□ -0.57
USP46-209ENST00000514536 BLMHQ13867 455 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 GPR157Q5UAW9 335 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 BRD3OSQ6XYD6 125 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 C1orf122Q6ZSJ8 110 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 PDZD9Q8IXQ8 264 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 OSR2Q8N2R0 312 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 TPRX1Q8N7U7 411 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 PPP1R35Q8TAP8 253 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 TBC1D15Q8TC07 691 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 SLITRK2Q9H156 845 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 SIRT7Q9NRC8 400 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 PCDHB16Q9NRJ7 776 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 ST3GAL6Q9Y274 331 aa11.46□□□□□ -0.57
USP46-209ENST00000514536 M0R1W7 72 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 SLC33A1O00400 549 aaPredicted RBP11.45□□□□□ -0.58
USP46-209ENST00000514536 MGST3O14880 152 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 ZNF780AO75290 641 aaPredicted RBP11.45□□□□□ -0.58
USP46-209ENST00000514536 ARL6IP5O75915 188 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 CCL3L1P16619 93 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 GPR176Q14439 515 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 ZNF273Q14593 569 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 IL13RA2Q14627 380 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 RUSC1-AS1Q66K80 236 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 GLT8D1Q68CQ7 371 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 AWAT2Q6E213 333 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 CHST4Q8NCG5 386 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 ZNF418Q8TF45 676 aaPredicted RBP11.45□□□□□ -0.58
USP46-209ENST00000514536 FOXRED1Q96CU9 486 aaPredicted RBP11.45□□□□□ -0.58
USP46-209ENST00000514536 UQCC2Q9BRT2 126 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 PPA2Q9H2U2 334 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 NDUFB11Q9NX14 153 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 ING3Q9NXR8 418 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 A0A1W2PPH5 198 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms