RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 IL13RA1P78552 427 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 IL13RA2Q14627 380 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 LRRC10Q5BKY1 277 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 CRIP3Q6Q6R5 217 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 USP43Q70EL4 1123 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 LYPD6Q86Y78 171 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 OR4D6Q8NGJ1 314 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 ANGPTL6Q8NI99 470 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 OR14J1Q9UGF5 321 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.78■□□□□ 0.28
USP53-208ENST00000514305 FOXH1O75593 365 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 IGHV2-5P01817 119 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 SFTPBP07988 381 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 WNT2P09544 360 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 CFPP27918 469 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 SERPINB10P48595 397 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 MXD1Q05195 221 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 NHLRC3Q5JS37 347 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 LCE2CQ5TA81 110 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 OR2W3Q7Z3T1 314 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 C1QL2Q7Z5L3 287 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 CHST4Q8NCG5 386 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 C19orf18Q8NEA5 215 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 OR51T1Q8NGJ9 327 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 URM1Q9BTM9 101 aaKnown RBP16.78■□□□□ 0.28
USP53-208ENST00000514305 CLN8Q9UBY8 286 aa16.78■□□□□ 0.28
USP53-208ENST00000514305 CCDC160A6NGH7 325 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 SIGLEC5O15389 551 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 CRTAPO75718 401 aaPredicted RBP16.77■□□□□ 0.28
USP53-208ENST00000514305 PITPNBP48739 271 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 SCAND1P57086 179 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 GNB2P62879 340 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 MPV17LQ2QL34 196 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 CD276Q5ZPR3 534 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 ZNF788Q6ZQV5 615 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 RNF144BQ7Z419 303 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 BATF2Q8N1L9 274 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 OR5T2Q8NGG2 359 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 OR5D13Q8NGL4 314 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 OR10K1Q8NGX5 313 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 FAM3DQ96BQ1 224 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 SDSLQ96GA7 329 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 CCL13Q99616 98 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 FAM234AQ9H0X4 552 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 SPACA1Q9HBV2 294 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 ST3GAL6Q9Y274 331 aa16.77■□□□□ 0.28
USP53-208ENST00000514305 FAM90A10PA6NDY2 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 FAM90A18PA6NE21 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 FAM90A16PA6NEW6 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 FAM90A20PA6NIJ5 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 FAM90A8PA6NJQ4 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 FAM90A7PA6NKC0 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 FAM90A22PA8MWA6 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 FAM90A12PA8MX19 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 FAM90A5PA8MXJ8 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 FAM90A23PA8MXZ1 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 DEGS1O15121 323 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 ECDO95905 644 aaPredicted RBP16.76■□□□□ 0.27
USP53-208ENST00000514305 HAND1O96004 215 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 FAM90A15PP0C7V4 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 FAM90A13PP0C7W8 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 FAM90A14PP0C7W9 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 FAM90A24PP0C7X0 464 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 ZNF44P15621 663 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 VBP1P61758 197 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 LMO4P61968 165 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 HES5Q5TA89 166 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 SFXN4Q6P4A7 337 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 TMEM186Q96B77 213 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 RNF167Q9H6Y7 350 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 LPAR2Q9HBW0 351 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 HIF1ANQ9NWT6 349 aa16.76■□□□□ 0.27
USP53-208ENST00000514305 SHISA3A0PJX4 238 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 FUOMA2VDF0 154 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 F5H0A9 414 aaPredicted RBP16.75■□□□□ 0.27
USP53-208ENST00000514305 TNFRSF13BO14836 293 aaPredicted RBP16.75■□□□□ 0.27
USP53-208ENST00000514305 MSMBP08118 114 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 CALCBP10092 127 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 MGMTP16455 207 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 SOX6P35712 828 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 OR10A3P58181 314 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 SCGB2A2Q13296 93 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 BLMHQ13867 455 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 C2orf76Q3KRA6 126 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 OR51D1Q8NGF3 324 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 SEH1LQ96EE3 360 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 SNX22Q96L94 193 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 GFI1Q99684 422 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 NKX3-1Q99801 234 aaPredicted RBP16.75■□□□□ 0.27
USP53-208ENST00000514305 SSBP3Q9BWW4 388 aaPredicted RBP16.75■□□□□ 0.27
USP53-208ENST00000514305 TMEM59Q9BXS4 323 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 DAPK2Q9UIK4 370 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 RAB22AQ9UL26 194 aa16.75■□□□□ 0.27
USP53-208ENST00000514305 IGKV1D-17A0A075B6S4 117 aa16.74■□□□□ 0.27
USP53-208ENST00000514305 SMIM31A0A1B0GVY4 71 aa16.74■□□□□ 0.27
USP53-208ENST00000514305 F8VVB4 439 aa16.74■□□□□ 0.27
USP53-208ENST00000514305 F8VWA3 439 aa16.74■□□□□ 0.27
USP53-208ENST00000514305 MPIG6BO95866 241 aa16.74■□□□□ 0.27
USP53-208ENST00000514305 RORCP51449 518 aa16.74■□□□□ 0.27
USP53-208ENST00000514305 SNU13P55769 128 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms