RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 TMEM106AQ96A25 262 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 SMIM19Q96E16 107 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 ZNF747Q9BV97 191 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 DCLRE1BQ9H816 532 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 ING3Q9NXR8 418 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 HSPE1-MOB4S4R3N1 261 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 KIAA2026Q5HYC2 2103 aa13.42□□□□□ -0.26
DDX41-213ENST00000512027 CRYBA1P05813 215 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 ZNF728P0DKX0 622 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 ZNF44P15621 663 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 C21orf33P30042 268 aaPredicted RBP13.41□□□□□ -0.26
DDX41-213ENST00000512027 AQP4P55087 323 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 SLC34A1Q06495 639 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 SRSF4Q08170 494 aaKnown RBP13.41□□□□□ -0.26
DDX41-213ENST00000512027 DMKNQ6E0U4 476 aaPredicted RBP13.41□□□□□ -0.26
DDX41-213ENST00000512027 OR52N1Q8NH53 320 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 HAVCR2Q8TDQ0 301 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 FBLIM1Q8WUP2 373 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 TNFAIP8L1Q8WVP5 186 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 DYRK2Q92630 601 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 TFAP2CQ92754 450 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 GPER1Q99527 375 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 PPA2Q9H2U2 334 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 DPAGT1Q9H3H5 408 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 HEXA-AS1Q9H8Q6 139 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 PSORS1C1Q9UIG5 152 aa13.41□□□□□ -0.26
DDX41-213ENST00000512027 TRRAPQ9Y4A5 3859 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 MAGEA13PA6NCF6 341 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 EFCAB10A6NFE3 127 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 H3BUX3 64 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 SH2D1BO14796 132 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 ALX3O95076 343 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 OR3A4PP47883 348 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 LY6EQ16553 131 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 MIDNQ504T8 468 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 PLA1AQ53H76 456 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 Q6P435 159 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 SAXO1Q8IYX7 474 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 DYNAPQ8N1N2 210 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 BEND2Q8NDZ0 799 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 GHSRQ92847 366 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 PGLYRP3Q96LB9 341 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 ZNF714Q96N38 554 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 NR1H4Q96RI1 486 aaPredicted RBP13.4□□□□□ -0.26
DDX41-213ENST00000512027 FAM192AQ9GZU8 254 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 VCXQ9H320 206 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 SEBOXQ9HB31 216 aaPredicted RBP13.4□□□□□ -0.26
DDX41-213ENST00000512027 CHCHD3Q9NX63 227 aaKnown RBP13.4□□□□□ -0.26
DDX41-213ENST00000512027 VPREB3Q9UKI3 123 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 ZNF281Q9Y2X9 895 aa13.4□□□□□ -0.26
DDX41-213ENST00000512027 hCG_1809904A0A1W2PP81 198 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 A0A1W2PPE2 198 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 A0A1W2PPK0 400 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 A0A1W2PR64 198 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 A0A1W2PRV1 198 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 HSPB6O14558 160 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 MGST3O14880 152 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 MMP23AO75900 390 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 CD2P06729 351 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 IGHV1-8P0DP01 117 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 GLIPR1P48060 266 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 P2RX3P56373 397 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 RPS11P62280 158 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDX41-213ENST00000512027 MEF2CQ06413 473 aaPredicted RBP13.39□□□□□ -0.27
DDX41-213ENST00000512027 GABPB1Q06547 395 aaPredicted RBP13.39□□□□□ -0.27
DDX41-213ENST00000512027 AESQ08117 197 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 MED21Q13503 144 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 ATXN7L3Q14CW9 347 aaPredicted RBP13.39□□□□□ -0.27
DDX41-213ENST00000512027 LDLRAD2Q5SZI1 272 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 BAIAP2L2Q6UXY1 529 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 TRAPPC6BQ86SZ2 158 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 STX19Q8N4C7 294 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 ZSCAN4Q8NAM6 433 aaPredicted RBP13.39□□□□□ -0.27
DDX41-213ENST00000512027 SGCDQ92629 289 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 SSX3Q99909 188 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 PLCXD1Q9NUJ7 323 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 CNOT2Q9NZN8 540 aaKnown RBP13.39□□□□□ -0.27
DDX41-213ENST00000512027 ZNF581Q9P0T4 197 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 GLS2Q9UI32 602 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 LINC00312Q9Y6C7 94 aa13.39□□□□□ -0.27
DDX41-213ENST00000512027 TRAV8-7A0A075B6U6 113 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 A0A0G2JK05 382 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 TRBV5-5A0A0J9YX44 114 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 hADV38S2A0JD32 116 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 BTBD17A6NE02 478 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 SLC33A1O00400 549 aaPredicted RBP13.38□□□□□ -0.27
DDX41-213ENST00000512027 MYL12BO14950 172 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 MAGEB3O15480 346 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 CDRT1O95170 752 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 NDUFA7O95182 113 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 ARG1P05089 322 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 PIGYQ3MUY2 71 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 DDI2Q5TDH0 399 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 Q6ZSV7 163 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 OR4F5Q8NH21 305 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 COQ2Q96H96 371 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 OR14A2Q96R54 314 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 BEX1Q9HBH7 125 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 FKBP14Q9NWM8 211 aa13.38□□□□□ -0.27
DDX41-213ENST00000512027 PCDHGB5Q9Y5G0 923 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms