RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ALOXE3Q9BYJ1 711 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR51I1Q9H343 314 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF703Q9H7S9 590 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 C14orf105Q9NVL8 296 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 GALPQ9UBC7 116 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 SCN8AQ9UQD0 1980 aa4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 ANKRD11Q6UB99 2663 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC11-208ENST00000511955 NBEAQ8NFP9 2946 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 A0A1B0GU03 582 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 ATP6AP2A0A1C7CYW4 349 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 TCRBV9S1A1TA0A576 114 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 F5H697 171 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 F6UZH7 168 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 SOX15O60248 233 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 GNG7O60262 68 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 PSPNO60542 156 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 TIAF1O95411 115 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 HAND1O96004 215 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 C8GP07360 202 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 TSPAN19P0C672 248 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 ESDP10768 282 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 GPX2P18283 190 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 IL1RNP18510 177 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 ETV6P41212 452 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR1D5P58170 312 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 NSDHLQ15738 373 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 PHLDA2Q53GA4 152 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 SPANXN3Q5MJ09 141 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 CLEC12AQ5QGZ9 265 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 HECTD2Q5U5R9 776 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 KDM4DQ6B0I6 523 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 REP15Q6BDI9 236 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF787Q6DD87 383 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 WDR74Q6RFH5 385 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 FAM19A1Q7Z5A9 133 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 PIP4P1Q86T03 277 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 VRK3Q8IV63 474 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 ACVR1CQ8NER5 493 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR11H4Q8NGC9 324 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR10G6Q8NH81 332 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 SYNPRQ8TBG9 265 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 CMSS1Q9BQ75 279 aaKnown RBP4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 SSBP4Q9BWG4 385 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 CHIAQ9BZP6 476 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 CXXC4Q9H2H0 198 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 TXNIPQ9H3M7 391 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 REEP4Q9H6H4 257 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 GALNT9Q9HCQ5 603 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 THYN1Q9P016 225 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 FOXJ2Q9P0K8 574 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 KLHL13Q9P2N7 655 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 TRAPPC4Q9Y296 219 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 AK6Q9Y3D8 172 aaKnown RBP4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 LOC400499M0QZD8 3231 aa4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 TPRP12270 2363 aaKnown RBP4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 ARHGEF17Q96PE2 2063 aaPredicted RBP4.31□□□□□ -1.72
TRAPPC11-208ENST00000511955 TRBV5-4A0A0C4DH59 114 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 LY6G6EA0A0G2JKS1 128 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 HMX2A2RU54 273 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 PRYO14603 147 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZG16O60844 167 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 FOXH1O75593 365 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 GADD45GO95257 159 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 OXTP01178 125 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 HLA-DQA2P01906 255 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF883P0CG24 379 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR13C7P0DN81 318 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 FOLR1P15328 257 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 MYL9P24844 172 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 TAS2R43P59537 309 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 ERVFRD-1P60508 538 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 RAB5BP61020 215 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 ECH1Q13011 328 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 GUSBP1Q15486 140 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 TAF9Q16594 264 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 SRSF7Q16629 238 aaKnown RBP eCLIP4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 AVPI1Q5T686 147 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 PAMR1Q6UXH9 720 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 HSD17B13Q7Z5P4 300 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 MRPL52Q86TS9 123 aaKnown RBP4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 LRRC28Q86X40 367 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 SLC22A15Q8IZD6 547 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 KLHDC1Q8N7A1 406 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 TPRX1Q8N7U7 411 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR13C6PQ8NH95 151 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 TAAR8Q969N4 342 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 TMEM159Q96B96 161 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 PIK3IP1Q96FE7 263 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 CMTM7Q96FZ5 175 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 LPAR4Q99677 370 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 NKX6-2Q9C056 277 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 MAGIXQ9H6Y5 334 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 CALML5Q9NZT1 146 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 MED11Q9P086 117 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 PLEKHB1Q9UF11 243 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 SCP2D1Q9UJQ7 156 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 ASF1AQ9Y294 204 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 LOXL2Q9Y4K0 774 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 U3KQA8 63 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 EPG5Q9HCE0 2579 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms