RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 PRRG3Q9BZD7 231 aa1.66□□□□□ -2.14
TRAPPC11-207ENST00000511409 NXF2Q9GZY0 626 aaKnown RBP1.66□□□□□ -2.14
TRAPPC11-207ENST00000511409 C14orf166Q9Y224 244 aaKnown RBP1.66□□□□□ -2.14
TRAPPC11-207ENST00000511409 STK38LQ9Y2H1 464 aa1.66□□□□□ -2.14
TRAPPC11-207ENST00000511409 BAZ1BQ9UIG0 1483 aaKnown RBP1.66□□□□□ -2.14
TRAPPC11-207ENST00000511409 SDK2Q58EX2 2172 aa1.66□□□□□ -2.14
TRAPPC11-207ENST00000511409 PRR14LQ5THK1 2151 aa1.65□□□□□ -2.14
TRAPPC11-207ENST00000511409 ADAMTSL3P82987 1691 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 IGKV1OR2-108A0A075B7D4 117 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 CD300LBA8K4G0 201 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 D6RAR5 112 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 H3BP45 60 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 H3BQ85 93 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 hCG_2039718K7EN88 272 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 ISLRO14498 428 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 SPOPO43791 374 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 PSIP1O75475 530 aaKnown RBP1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 CD8AP01732 235 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 S100A9P06702 114 aaKnown RBP1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 SOD3P08294 240 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 M6PRP20645 277 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 S100A2P29034 98 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 VSNL1P62760 191 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 MEF2BQ02080 365 aaPredicted RBP1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 C2orf80Q0P641 193 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 CEACAM16Q2WEN9 425 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 Q499Y3 187 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 ACTL10Q5JWF8 245 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 CLEC12AQ5QGZ9 265 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 ERICH5Q6P6B1 374 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 CLEC18BQ6UXF7 455 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 LRP11Q86VZ4 500 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 C10orf107Q8IVU9 208 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 IGF2BP2-AS1Q96M15 143 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZNF436Q9C0F3 470 aaPredicted RBP1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 SLC25A31Q9H0C2 315 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 GABARAPL1Q9H0R8 117 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 TXNIPQ9H3M7 391 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 POMKQ9H5K3 350 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 RHOFQ9HBH0 211 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 DIABLOQ9NR28 239 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZNF586Q9NXT0 402 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 RBM12B-AS1Q9P1G2 102 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 MCTS1Q9ULC4 181 aaKnown RBP1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 CARHSP1Q9Y2V2 147 aaKnown RBP1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 RBMX2Q9Y388 322 aaKnown RBP1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 CACNA1DQ01668 2161 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 SSH2Q76I76 1423 aa1.65□□□□□ -2.15
TRAPPC11-207ENST00000511409 VWA8A3KMH1 1905 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 A0A0B4J2C4 111 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 A0A1B0GW15 77 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZNF729A6NN14 1252 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 PSMD11O00231 422 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 GYG2O15488 501 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 SYNGR2O43760 224 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 TPM1P09493 284 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZNF83P51522 516 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 RAB38P57729 211 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 UBE2KP61086 200 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 TNXAQ16473 311 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 NXNL2Q5VZ03 156 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 HBMQ6B0K9 141 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 SSX6Q7RTT6 188 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 DPPA2Q7Z7J5 298 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 RBM45Q8IUH3 476 aaKnown RBP1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 ST13P4Q8IZP2 240 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZFP82Q8N141 532 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 EIF4E3Q8N5X7 224 aaKnown RBP1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZNF75CPQ92670 426 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZMYND19Q96E35 227 aaPredicted RBP1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 MSANTD3Q96H12 275 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZNF75AQ96N20 296 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 LINC01587Q99440 93 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 TMBIM4Q9HC24 238 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 RMND1Q9NWS8 449 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZBED9Q6R2W3 1325 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 NRCAMQ92823 1304 aa1.64□□□□□ -2.15
TRAPPC11-207ENST00000511409 IGHV3-21A0A0B4J1V1 117 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 F5H5P2 479 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 M0QXV9 152 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 AQP9O43315 295 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZMPSTE24O75844 475 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 MYO1DO94832 1006 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 IGKV1D-33P01593 117 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 IGKV1-33P01594 117 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 CECR9P0C854 216 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 GTF2F2P13984 249 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 ZNF708P17019 499 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 CRABP2P29373 138 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 TRIP13Q15645 432 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 TPGS1Q6ZTW0 290 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 OR4K17Q8NGC6 315 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 IFT81Q8WYA0 676 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 CCL17Q92583 94 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 PKMYT1Q99640 499 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 RAB1BQ9H0U4 201 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 XKR8Q9H6D3 395 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 HAUS4Q9H6D7 363 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 PLEKHA1Q9HB21 404 aa1.63□□□□□ -2.15
TRAPPC11-207ENST00000511409 CLEC2DQ9UHP7 191 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms