RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 ASF1BQ9NVP2 202 aa9.96□□□□□ -0.81
PRPF40B-203ENST00000508736 PRR13Q9NZ81 148 aa9.96□□□□□ -0.81
PRPF40B-203ENST00000508736 COQ3Q9NZJ6 369 aa9.96□□□□□ -0.81
PRPF40B-203ENST00000508736 GSKIPQ9P0R6 139 aa9.96□□□□□ -0.81
PRPF40B-203ENST00000508736 CLCF1Q9UBD9 225 aa9.96□□□□□ -0.81
PRPF40B-203ENST00000508736 ST3GAL6Q9Y274 331 aa9.96□□□□□ -0.81
PRPF40B-203ENST00000508736 SSUH2Q9Y2M2 353 aa9.96□□□□□ -0.81
PRPF40B-203ENST00000508736 LAMA5O15230 3695 aa9.96□□□□□ -0.82
PRPF40B-203ENST00000508736 GEMIN2O14893 280 aaKnown RBP9.96□□□□□ -0.82
PRPF40B-203ENST00000508736 TPD52L2O43399 206 aaKnown RBP9.96□□□□□ -0.82
PRPF40B-203ENST00000508736 EDN3P14138 238 aa9.96□□□□□ -0.82
PRPF40B-203ENST00000508736 RBM11P57052 281 aaKnown RBP9.96□□□□□ -0.82
PRPF40B-203ENST00000508736 PMP22Q01453 160 aa9.96□□□□□ -0.82
PRPF40B-203ENST00000508736 RBM39Q14498 530 aaKnown RBP9.96□□□□□ -0.82
PRPF40B-203ENST00000508736 IAH1Q2TAA2 248 aaPredicted RBP9.96□□□□□ -0.82
PRPF40B-203ENST00000508736 DHRS11Q6UWP2 260 aa9.96□□□□□ -0.82
PRPF40B-203ENST00000508736 ZC4H2Q9NQZ6 224 aa9.96□□□□□ -0.82
PRPF40B-203ENST00000508736 OR5AC2Q9NZP5 309 aa9.96□□□□□ -0.82
PRPF40B-203ENST00000508736 PCDHB10Q9UN67 800 aa9.96□□□□□ -0.82
PRPF40B-203ENST00000508736 ZNF407Q9C0G0 2248 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 LOC400499M0QZD8 3231 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 LOC105371267A0A1B0GV96 52 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A10PA6NDY2 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A18PA6NE21 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A16PA6NEW6 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A20PA6NIJ5 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A8PA6NJQ4 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A7PA6NKC0 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 MPTX1A8MV57 137 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A22PA8MWA6 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A12PA8MX19 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A5PA8MXJ8 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A23PA8MXZ1 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 APOC3P02656 99 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A15PP0C7V4 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A13PP0C7W8 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A14PP0C7W9 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM90A24PP0C7X0 464 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FUT3P21217 361 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 OPRM1P35372 400 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 FOXG1P55316 489 aaPredicted RBP9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 RAB1AP62820 205 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 IL15RAQ13261 267 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 BTN1A1Q13410 526 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 PIGYQ3MUY2 71 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 TMEM211Q6ICI0 200 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 SLC22A25Q6T423 547 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 TFAP2EQ6VUC0 442 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 TMEM200AQ86VY9 491 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 OR1K1Q8NGR3 316 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 SARAFQ96BY9 339 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 NARS2Q96I59 477 aaKnown RBP9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 SUCNR1Q9BXA5 334 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 OPA3Q9H6K4 179 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 NAA60Q9H7X0 242 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 CYTL1Q9NRR1 136 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 ZFP57Q9NU63 452 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 TMEM100Q9NV29 134 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 TUBD1Q9UJT1 453 aa9.95□□□□□ -0.82
PRPF40B-203ENST00000508736 A0A096LPE4 126 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 IGKV1-12A0A0C4DH73 117 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 A0A1W2PPZ6 126 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 PRSS44E7EML9 344 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 KCNAB3O43448 404 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 CNOT4O95628 575 aaKnown RBP9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 IL18BPO95998 194 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 IGKV1D-12P01611 117 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 HLA-HP01893 362 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 PRSS12P56730 875 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 PIGPP57054 158 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 PLP2Q04941 152 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 GUSBP1Q15486 140 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 MRPL21Q7Z2W9 205 aaKnown RBP9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 SAXO1Q8IYX7 474 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 ZADH2Q8N4Q0 377 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 ZNF611Q8N823 705 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 CCDC71LQ8N9Z2 235 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 SPERTQ8NA61 448 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 NANOS1Q8WY41 292 aaKnown RBP9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 TOMM40LQ969M1 308 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 APOBEC3DQ96AK3 386 aaPredicted RBP9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 CNTNAP3BQ96NU0 1288 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 SYT3Q9BQG1 590 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 PAPOLGQ9BWT3 736 aaKnown RBP9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 CNTNAP3Q9BZ76 1288 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 SLC5A7Q9GZV3 580 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 ZNF442Q9H7R0 627 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 PRSS50Q9UI38 385 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 DNAJC13O75165 2243 aa9.94□□□□□ -0.82
PRPF40B-203ENST00000508736 MSGN1A6NI15 193 aa9.93□□□□□ -0.82
PRPF40B-203ENST00000508736 K7EPK0 472 aa9.93□□□□□ -0.82
PRPF40B-203ENST00000508736 TSPAN4O14817 238 aa9.93□□□□□ -0.82
PRPF40B-203ENST00000508736 UCP3P55916 312 aa9.93□□□□□ -0.82
PRPF40B-203ENST00000508736 HERV-K104P61576 105 aa9.93□□□□□ -0.82
PRPF40B-203ENST00000508736 C9orf135Q5VTT2 229 aa9.93□□□□□ -0.82
PRPF40B-203ENST00000508736 P4HA3Q7Z4N8 544 aa9.93□□□□□ -0.82
PRPF40B-203ENST00000508736 FAM71E2Q8N5Q1 922 aa9.93□□□□□ -0.82
PRPF40B-203ENST00000508736 NAXEQ8NCW5 288 aa9.93□□□□□ -0.82
PRPF40B-203ENST00000508736 BPIFCQ8NFQ6 507 aa9.93□□□□□ -0.82
PRPF40B-203ENST00000508736 OR1S2Q8NGQ3 325 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms