RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 C17orf78Q8N4C9 275 aa15.08■□□□□ 0
SFXN1-208ENST00000507823 POC1AQ8NBT0 407 aa15.08■□□□□ 0
SFXN1-208ENST00000507823 BHLHE23Q8NDY6 225 aa15.08■□□□□ 0
SFXN1-208ENST00000507823 MBD3L2Q8NHZ7 208 aaPredicted RBP15.08■□□□□ 0
SFXN1-208ENST00000507823 THAP6Q8TBB0 222 aa15.08■□□□□ 0
SFXN1-208ENST00000507823 RNF126Q9BV68 326 aa15.08■□□□□ 0
SFXN1-208ENST00000507823 Q9N2K0 584 aa15.08■□□□□ 0
SFXN1-208ENST00000507823 TNFSF13O75888 250 aa15.08■□□□□ 0
SFXN1-208ENST00000507823 IDH3GP51553 393 aaPredicted RBP15.08■□□□□ 0
SFXN1-208ENST00000507823 C2orf50Q96LR7 162 aa15.08■□□□□ 0
SFXN1-208ENST00000507823 C1orf123Q9NWV4 160 aa15.08■□□□□ 0
SFXN1-208ENST00000507823 FAM221AA4D161 298 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 BCL2L11O43521 198 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 ADAP1O75689 374 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 ZNF728P0DKX0 622 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 RRASP10301 218 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 TUBG1P23258 451 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 UBA52P62987 128 aaKnown RBP15.07■□□□□ 0
SFXN1-208ENST00000507823 SGPP2Q8IWX5 399 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 SLX1AQ9BQ83 275 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 OBP2BQ9NPH6 170 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 TUBG2Q9NRH3 451 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 MBD2Q9UBB5 411 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 POM121CA8CG34 1229 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 PROB1E7EW31 1015 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 CA6P23280 308 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 UCP2P55851 309 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 CNEP1R1Q8N9A8 125 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 RTL8AQ9BWD3 113 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 WDR13Q9H1Z4 485 aa15.07■□□□□ 0
SFXN1-208ENST00000507823 RIMS4Q9H426 269 aaPredicted RBP15.07■□□□□ 0
SFXN1-208ENST00000507823 SHANK1Q9Y566 2161 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 C13orf42A0A1B0GVH6 325 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 LRP5LA4QPB2 252 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 KNG1P01042 644 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 SELEP16581 610 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 FCGR2CP31995 323 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 FOXF2Q12947 444 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 LRRC37A5PQ49AS3 106 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 SEM1Q6ZVN7 128 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 FAM169BQ8N8A8 192 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 LRTM2Q8N967 370 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 VRK1Q99986 396 aaPredicted RBP15.06■□□□□ 0
SFXN1-208ENST00000507823 MICU1Q9BPX6 476 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 RSRP1Q9BUV0 290 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 OR2J1Q9GZK6 312 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 IL36RNQ9UBH0 155 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 IGLV1-44P01699 117 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 IL32P24001 234 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 ERVK11-1P61568 191 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 ZNF880Q6PDB4 577 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 WDR86Q86TI4 376 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 SLC38A6Q8IZM9 456 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 OR10C1Q96KK4 312 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 CITED4Q96RK1 184 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 OR51B6Q9H340 312 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 PRR13Q9NZ81 148 aa15.06■□□□□ 0
SFXN1-208ENST00000507823 RIF1Q5UIP0 2472 aaKnown RBP15.06■□□□□ 0
SFXN1-208ENST00000507823 H0YIZ8 118 aa15.05■□□□□ 0
SFXN1-208ENST00000507823 NMBP08949 121 aa15.05■□□□□ 0
SFXN1-208ENST00000507823 ACAA1P09110 424 aaPredicted RBP15.05■□□□□ 0
SFXN1-208ENST00000507823 RBMXP38159 391 aaKnown RBP15.05■□□□□ 0
SFXN1-208ENST00000507823 GLP1RP43220 463 aa15.05■□□□□ 0
SFXN1-208ENST00000507823 RBM39Q14498 530 aaKnown RBP15.05■□□□□ 0
SFXN1-208ENST00000507823 SPATA46Q5T0L3 261 aa15.05■□□□□ 0
SFXN1-208ENST00000507823 FAM58AQ8N1B3 248 aa15.05■□□□□ 0
SFXN1-208ENST00000507823 SLC25A40Q8TBP6 338 aa15.05■□□□□ 0
SFXN1-208ENST00000507823 STARD4Q96DR4 205 aa15.05■□□□□ 0
SFXN1-208ENST00000507823 NAA60Q9H7X0 242 aa15.05■□□□□ 0
SFXN1-208ENST00000507823 SSUH2Q9Y2M2 353 aa15.05■□□□□ 0
SFXN1-208ENST00000507823 URB1O60287 2271 aaKnown RBP15.05■□□□□ -0
SFXN1-208ENST00000507823 MPTX1A8MV57 137 aa15.05■□□□□ -0
SFXN1-208ENST00000507823 PRKACAP17612 351 aa15.05■□□□□ -0
SFXN1-208ENST00000507823 PIGPP57054 158 aa15.05■□□□□ -0
SFXN1-208ENST00000507823 P2RY6Q15077 328 aa15.05■□□□□ -0
SFXN1-208ENST00000507823 PRSS54Q6PEW0 395 aa15.05■□□□□ -0
SFXN1-208ENST00000507823 BATF2Q8N1L9 274 aa15.05■□□□□ -0
SFXN1-208ENST00000507823 ST8SIA2Q92186 375 aa15.05■□□□□ -0
SFXN1-208ENST00000507823 ZNF71Q9NQZ8 489 aaPredicted RBP15.05■□□□□ -0
SFXN1-208ENST00000507823 ESPL1Q14674 2120 aa15.05■□□□□ -0
SFXN1-208ENST00000507823 MUC6Q6W4X9 2439 aa15.04■□□□□ -0
SFXN1-208ENST00000507823 TEX13DA0A0J9YY54 714 aaPredicted RBP15.04■□□□□ -0
SFXN1-208ENST00000507823 A0A1W2PR80 420 aa15.04■□□□□ -0
SFXN1-208ENST00000507823 TMEM187Q14656 261 aa15.04■□□□□ -0
SFXN1-208ENST00000507823 Q8IYB0 196 aa15.04■□□□□ -0
SFXN1-208ENST00000507823 KANTRA0A1W2PQU2 76 aa15.04■□□□□ -0
SFXN1-208ENST00000507823 PDGFAP04085 211 aa15.04■□□□□ -0
SFXN1-208ENST00000507823 KCNJ3P48549 501 aa15.04■□□□□ -0
SFXN1-208ENST00000507823 AP2S1P53680 142 aaPredicted RBP15.04■□□□□ -0
SFXN1-208ENST00000507823 RGS7BPQ6MZT1 257 aaPredicted RBP15.04■□□□□ -0
SFXN1-208ENST00000507823 Q6P435 159 aa15.04■□□□□ -0
SFXN1-208ENST00000507823 RBMXL3Q8N7X1 1067 aaKnown RBP15.04■□□□□ -0
SFXN1-208ENST00000507823 SUMF2Q8NBJ7 301 aa15.04■□□□□ -0
SFXN1-208ENST00000507823 PHYHIPLQ96FC7 376 aa15.04■□□□□ -0
SFXN1-208ENST00000507823 SUCNR1Q9BXA5 334 aa15.04■□□□□ -0
SFXN1-208ENST00000507823 LOC400499M0QZD8 3231 aa15.04■□□□□ -0
SFXN1-208ENST00000507823 ZFHX4Q86UP3 3567 aa15.03■□□□□ -0
SFXN1-208ENST00000507823 TRAV24A0A0B4J272 114 aa15.03■□□□□ -0
SFXN1-208ENST00000507823 KIR2DS1A0A191URI9 304 aa15.03■□□□□ -0
SFXN1-208ENST00000507823 TUSC2O75896 110 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms