RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 GLYATQ6IB77 296 aa2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 USP50Q70EL3 339 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 AMN1Q8IY45 258 aa2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 SPICQ8N5J4 248 aa2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 OR4K17Q8NGC6 315 aa2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 OR2K2Q8NGT1 345 aa2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 C2orf15Q8WU43 125 aaKnown RBP2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 CCL17Q92583 94 aa2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 C19orf60Q96EN9 201 aa2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 POMKQ9H5K3 350 aa2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 ASF1BQ9NVP2 202 aa2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 RBM12B-AS1Q9P1G2 102 aa2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 NXT1Q9UKK6 140 aaKnown RBP2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 C14orf166Q9Y224 244 aaKnown RBP2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 ICOSQ9Y6W8 199 aa2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 R4GN34 69 aa2.01□□□□□ -2.09
HMGB1P28-201ENST00000507778 NID2Q14112 1375 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 IGKV1OR2-108A0A075B7D4 117 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 A0A1B0GXF2 115 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 PGPA6NDG6 321 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 LEUTXA8MZ59 168 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 ZNF879B4DU55 563 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 FFAR1O14842 300 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 ENTPD6O75354 484 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 CECR9P0C854 216 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 M6PRP20645 277 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 GCLMP48507 274 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 TTPAP49638 278 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 KRTAP10-1P60331 282 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 PSG3Q16557 428 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 FBXO48Q5FWF7 155 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 LCE1CQ5T751 118 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 TPGS1Q6ZTW0 290 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 TMEM239Q8WW34 195 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 CCDC124Q96CT7 223 aaKnown RBP2□□□□□ -2.09
HMGB1P28-201ENST00000507778 ZMYND19Q96E35 227 aaPredicted RBP2□□□□□ -2.09
HMGB1P28-201ENST00000507778 CPB2Q96IY4 423 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 ZNF75AQ96N20 296 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 BIRC8Q96P09 236 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 PITX2Q99697 317 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 APOL4Q9BPW4 351 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 SLC25A31Q9H0C2 315 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 GOLPH3Q9H4A6 298 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 BRCA1P38398 1863 aaKnown RBP2□□□□□ -2.09
HMGB1P28-201ENST00000507778 SSH2Q76I76 1423 aa2□□□□□ -2.09
HMGB1P28-201ENST00000507778 ZBED9Q6R2W3 1325 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 IGHV3-43A0A0B4J1X8 118 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 MYBPHLA2RUH7 354 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 UBDO15205 165 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 CBR3O75828 277 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 CST4P01036 141 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 IGKV5-2P06315 115 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 PRPS1L1P21108 318 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 ELK4P28324 431 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 LCN1P31025 176 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 RPA3P35244 121 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 LGALS7P47929 136 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 ZNF83P51522 516 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 UBE2KP61086 200 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 TRAM1Q15629 374 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 TRIP13Q15645 432 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 PDZD11Q5EBL8 140 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 TMEM215Q68D42 235 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 AMMECR1LQ6DCA0 310 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 ERICH5Q6P6B1 374 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 Q6ZT83 130 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 DPPA2Q7Z7J5 298 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 CPNE9Q8IYJ1 553 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 ZFP82Q8N141 532 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 RPRMLQ8N4K4 120 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 CDRT4Q8N9R6 151 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 TWIST2Q8WVJ9 160 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 IFT81Q8WYA0 676 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 OTUB2Q96DC9 234 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 CATSPER2Q96P56 530 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 OLFM3Q96PB7 478 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 ULBP1Q9BZM6 244 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 ZNF436Q9C0F3 470 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 ABCG5Q9H222 651 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 TXNIPQ9H3M7 391 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 CYB5R1Q9UHQ9 305 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 USH1CQ9Y6N9 552 aa1.99□□□□□ -2.09
HMGB1P28-201ENST00000507778 TRAV8-3A0A0A6YYJ7 113 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 IGHV3-21A0A0B4J1V1 117 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 D6RAR5 112 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 F5H5P2 479 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 H3BP45 60 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 M0QXV9 152 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 PLPP3O14495 311 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 HLA-AP01891 365 aaKnown RBP1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 TRGV3P03979 118 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 SLC2A1P11166 492 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 GTF2H1P32780 548 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 MAGEA3P43357 314 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 RAB25P57735 213 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 BAXQ07812 192 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 STX3Q13277 289 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 SLC9A3R2Q15599 337 aa1.98□□□□□ -2.09
HMGB1P28-201ENST00000507778 PYDC2Q56P42 97 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms