RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 GOLGA8IPA6NC78 632 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 GMNCA6NCL1 334 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 MGAT4DA6NG13 374 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 OR2AT4A6NND4 320 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 CD300LBA8K4G0 201 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 IGLL5B9A064 214 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 PLPP3O14495 311 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 SC5DO75845 299 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 FADS2O95864 444 aaKnown RBP1.11□□□□□ -2.23
GYPB-207ENST00000506679 CST4P01036 141 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 CD8AP01732 235 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 GIMD1P0DJR0 217 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 LIPCP11150 499 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 SLC6A1P30531 599 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 ATP5J2P56134 94 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 KLF3P57682 345 aaPredicted RBP1.11□□□□□ -2.23
GYPB-207ENST00000506679 C2orf80Q0P641 193 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 STX4Q12846 297 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 ZNF141Q15928 474 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 KCTD16Q68DU8 428 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 TCF24Q7RTU0 167 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 TMEM144Q7Z5S9 345 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 ITPRIPQ8IWB1 547 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 CCNYL1Q8N7R7 359 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 ZDHHC22Q8N966 263 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 OR4K2Q8NGD2 314 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 OR5H2Q8NGV7 314 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 MUC7Q8TAX7 377 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 UBA3Q8TBC4 463 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 SMIM8Q96KF7 97 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 ZNF396Q96N95 335 aaPredicted RBP1.11□□□□□ -2.23
GYPB-207ENST00000506679 QKIQ96PU8 341 aaKnown RBP eCLIP1.11□□□□□ -2.23
GYPB-207ENST00000506679 SHCBP1LQ9BZQ2 653 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 NXF2Q9GZY0 626 aaKnown RBP1.11□□□□□ -2.23
GYPB-207ENST00000506679 CHRNA10Q9GZZ6 450 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 ABCG5Q9H222 651 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 DIABLOQ9NR28 239 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 SDHAF3Q9NRP4 125 aa1.11□□□□□ -2.23
GYPB-207ENST00000506679 SETD1AO15047 1707 aaKnown RBP1.11□□□□□ -2.23
GYPB-207ENST00000506679 USP42Q9H9J4 1324 aaKnown RBP1.11□□□□□ -2.23
GYPB-207ENST00000506679 MYO9BQ13459 2157 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 SPATA31E1Q6ZUB1 1445 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 C17orf51A8MQB3 221 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 HSBP1L1C9JCN9 74 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 E7EQL1 145 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 K7EN84 100 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 hCG_2039718K7EN88 272 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 M0QX08 132 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 UBDO15205 165 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 CRXO43186 299 aaPredicted RBP1.1□□□□□ -2.23
GYPB-207ENST00000506679 AQP9O43315 295 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 ENTPD6O75354 484 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 OR2A4O95047 310 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 CDK1P06493 297 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 ELK4P28324 431 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 CASQ1P31415 396 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 GTF2H1P32780 548 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 RPA3P35244 121 aaPredicted RBP1.1□□□□□ -2.23
GYPB-207ENST00000506679 TUFMP49411 452 aaKnown RBP1.1□□□□□ -2.23
GYPB-207ENST00000506679 TTPAP49638 278 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 XKP51811 444 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 RAB38P57729 211 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 BNIP2Q12982 314 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 GPR176Q14439 515 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 GUSBP1Q15486 140 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 TNXAQ16473 311 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 ZNF404Q494X3 552 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 CLLU1OSQ5K130 101 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 HBMQ6B0K9 141 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 SPNS3Q6ZMD2 512 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 COPS6Q7L5N1 327 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 PRNTQ86SH4 94 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 MRPL52Q86TS9 123 aaKnown RBP1.1□□□□□ -2.23
GYPB-207ENST00000506679 COMTD1Q86VU5 262 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 CYP4Z2PQ8N1L4 340 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 GAPTQ8N292 157 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 TCAIMQ8N3R3 496 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 SPICQ8N5J4 248 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 ATPAF2Q8N5M1 289 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 DRAXINQ8NBI3 349 aaPredicted RBP1.1□□□□□ -2.23
GYPB-207ENST00000506679 OR8G5Q8NG78 346 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 NELFBQ8WX92 580 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 IFT81Q8WYA0 676 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 PPP1R36Q96LQ0 422 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 IGF2BP2-AS1Q96M15 143 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 OR2A7Q96R45 310 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 PITX2Q99697 317 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 PRRG3Q9BZD7 231 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 OR52A5Q9H2C5 316 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 DSN1Q9H410 356 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 DDIT4Q9NX09 232 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 INSIG2Q9Y5U4 225 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 USH1CQ9Y6N9 552 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 ZNF780BQ9Y6R6 833 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 MUC6Q6W4X9 2439 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 NRCAMQ92823 1304 aa1.1□□□□□ -2.23
GYPB-207ENST00000506679 SSH2Q76I76 1423 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 GOLGA8QA0A0J9YX86 632 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 A0A1B0GTI1 187 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 LOC389332A0A1B0GUA5 103 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms