RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 OR8U8P0C7N1 319 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 BTF3P20290 206 aaKnown RBP5.38□□□□□ -1.55
VCAN-206ENST00000505615 CFL1P23528 166 aaKnown RBP5.38□□□□□ -1.55
VCAN-206ENST00000505615 POU3F4P49335 361 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 EDDM3BP56851 147 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 ZNF121P58317 390 aaPredicted RBP5.38□□□□□ -1.55
VCAN-206ENST00000505615 GNG3P63215 75 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 GPR50Q13585 617 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 EIF2B1Q14232 305 aaKnown RBP5.38□□□□□ -1.55
VCAN-206ENST00000505615 SNCBQ16143 134 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 TPTE2P1Q5T6R2 138 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 STEAP3Q658P3 488 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 HAGHLQ6PII5 290 aaPredicted RBP5.38□□□□□ -1.55
VCAN-206ENST00000505615 FAM57BQ71RH2 274 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 FTMTQ8N4E7 242 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 SETD6Q8TBK2 473 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 GIMAP1Q8WWP7 306 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 PIGCQ92535 297 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 DCUN1D4Q92564 292 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 ST6GALNAC6Q969X2 333 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 ERMAPQ96PL5 475 aaPredicted RBP5.38□□□□□ -1.55
VCAN-206ENST00000505615 FAM110AQ9BQ89 295 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 TMEM109Q9BVC6 243 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 GNB4Q9HAV0 340 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 HES4Q9HCC6 221 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 CENPMQ9NSP4 180 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 PPP1R14DQ9NXH3 145 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 ACTR3BQ9P1U1 418 aa5.38□□□□□ -1.55
VCAN-206ENST00000505615 DMBT1Q9UGM3 2413 aaPredicted RBP5.37□□□□□ -1.55
VCAN-206ENST00000505615 DHRS12A0PJE2 317 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 MAGEA13PA6NCF6 341 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 LEUTXA8MZ59 168 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 H3BSH0 61 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 OVOL1O14753 267 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 NOS1APO75052 506 aaPredicted RBP5.37□□□□□ -1.55
VCAN-206ENST00000505615 TSC22D2O75157 780 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 SAP30O75446 220 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 IGHG4P01861 327 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 PSMB8P28062 276 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 CD34P28906 385 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 IFNA8P32881 189 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 GPR12P47775 334 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 ARHGDIBP52566 201 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 ESRRGP62508 458 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 GNB1P62873 340 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 GRB2P62993 217 aaKnown RBP5.37□□□□□ -1.55
VCAN-206ENST00000505615 HTD2P86397 168 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 RUNX1Q01196 453 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 MEF2CQ06413 473 aaPredicted RBP5.37□□□□□ -1.55
VCAN-206ENST00000505615 ZNF616Q08AN1 781 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 IFFO1Q0D2I5 559 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 KIAA0141Q14154 515 aaPredicted RBP5.37□□□□□ -1.55
VCAN-206ENST00000505615 TAF13Q15543 124 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 HLA-DRB5Q30154 266 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 LRRC23Q53EV4 343 aaPredicted RBP5.37□□□□□ -1.55
VCAN-206ENST00000505615 TNFAIP8L3Q5GJ75 292 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 FGD3Q5JSP0 725 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 CEP78Q5JTW2 689 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 KRBOX4Q5JUW0 171 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 UTF1Q5T230 341 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 RNLSQ5VYX0 342 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 NANOGP8Q6NSW7 305 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 TRAT1Q6PIZ9 186 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 ZBTB49Q6ZSB9 765 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 VTCN1Q7Z7D3 282 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 FOXRED2Q8IWF2 684 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 BATF2Q8N1L9 274 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 ABHD12Q8N2K0 398 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 MREGQ8N565 214 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 OR6Q1Q8NGQ2 317 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 ZNF671Q8TAW3 534 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 LZICQ8WZA0 190 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 TPD52L3Q96J77 140 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 PAIP2Q9BPZ3 127 aaKnown RBP5.37□□□□□ -1.55
VCAN-206ENST00000505615 NRIP2Q9BQI9 281 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 EBF4Q9BQW3 602 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 NSRP1Q9H0G5 558 aaKnown RBP5.37□□□□□ -1.55
VCAN-206ENST00000505615 OR10A2Q9H208 303 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 HIPK2Q9H2X6 1198 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 RGCCQ9H4X1 137 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 ANKRD19PQ9H560 264 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 DNAJC27Q9NZQ0 273 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 EXTL2Q9UBQ6 330 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 DNAJB9Q9UBS3 223 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 OR14J1Q9UGF5 321 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 LINC00312Q9Y6C7 94 aa5.37□□□□□ -1.55
VCAN-206ENST00000505615 TRAV34A0A0B4J273 112 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 A0A1W2PPI3 338 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 FAM172BPA6NC97 362 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 ARRDC5A6NEK1 342 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 UNC119BA6NIH7 251 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 OOSP1A8MZH6 123 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 BUB1B-PAK6H3BSN5 160 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 J3QT63 122 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 FXYD1O00168 92 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 AP4M1O00189 453 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 RAB27BO00194 218 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 PSMD9O00233 223 aa5.36□□□□□ -1.55
VCAN-206ENST00000505615 CASQ2O14958 399 aaPredicted RBP5.36□□□□□ -1.55
VCAN-206ENST00000505615 NXPH2O95156 264 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms