RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 HSD17B6O14756 317 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 NDUFS6O75380 124 aaKnown RBP10.28□□□□□ -0.76
UBE3D-206ENST00000505226 SCRG1O75711 98 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 TMEM50AO95807 157 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 PYY3Q5JQD4 70 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 ZNF385CQ66K41 422 aaPredicted RBP10.28□□□□□ -0.76
UBE3D-206ENST00000505226 ASCL4Q6XD76 172 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 KMT5CQ86Y97 462 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 LGI3Q8N145 548 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 SUMF2Q8NBJ7 301 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 OR2G3Q8NGZ4 309 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 PBDC1Q9BVG4 233 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 MAGT1Q9H0U3 335 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 GLRX2Q9NS18 164 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 P4HTMQ9NXG6 502 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 RBFOX3A6NFN3 312 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 SLC33A1O00400 549 aaPredicted RBP10.28□□□□□ -0.76
UBE3D-206ENST00000505226 RPS10P46783 165 aaKnown RBP10.28□□□□□ -0.76
UBE3D-206ENST00000505226 TSC22D1Q15714 1073 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 CXorf66Q5JRM2 361 aaPredicted RBP10.28□□□□□ -0.76
UBE3D-206ENST00000505226 OR2C3Q8N628 320 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 C10orf35Q96D05 121 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 RAB39BQ96DA2 213 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 TMPRSS5Q9H3S3 457 aa10.28□□□□□ -0.76
UBE3D-206ENST00000505226 SYNGR3O43761 229 aa10.27□□□□□ -0.76
UBE3D-206ENST00000505226 HOXA5P20719 270 aa10.27□□□□□ -0.76
UBE3D-206ENST00000505226 CEBPGP53567 150 aa10.27□□□□□ -0.76
UBE3D-206ENST00000505226 HIKESHIQ53FT3 197 aa10.27□□□□□ -0.76
UBE3D-206ENST00000505226 Q8WTZ3 238 aa10.27□□□□□ -0.76
UBE3D-206ENST00000505226 PROK2Q9HC23 129 aa10.27□□□□□ -0.76
UBE3D-206ENST00000505226 ST3GAL6Q9Y274 331 aa10.27□□□□□ -0.76
UBE3D-206ENST00000505226 LIPGQ9Y5X9 500 aa10.27□□□□□ -0.76
UBE3D-206ENST00000505226 CCDC163A0A0D9SF12 145 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 ZIC3O60481 467 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 GNRHRP30968 328 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 ERVFRD-1P60508 538 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 KIAA0141Q14154 515 aaPredicted RBP10.27□□□□□ -0.77
UBE3D-206ENST00000505226 ZNF468Q5VIY5 522 aaPredicted RBP10.27□□□□□ -0.77
UBE3D-206ENST00000505226 SPSB1Q96BD6 273 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 WNT16Q9UBV4 365 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 URGCP-MRPS24S4R325 110 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 C3orf85A0A1B0GTC6 90 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 NXPH3O95157 252 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 SRP19P09132 144 aaKnown RBP10.27□□□□□ -0.77
UBE3D-206ENST00000505226 RBP2P50120 134 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 RAB1AP62820 205 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 RUNX1Q01196 453 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 ELOBQ15370 118 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 FAM27BQ5VT28 67 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 FGFBP3Q8TAT2 258 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 SPTSSAQ969W0 71 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 SRXN1Q9BYN0 137 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 DEFB126Q9BYW3 111 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 TOLLIPQ9H0E2 274 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 HS3ST3B1Q9Y662 390 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 CEP192Q8TEP8 1941 aa10.27□□□□□ -0.77
UBE3D-206ENST00000505226 NPIPA2E9PIF3 369 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 NPIPA3F8WFD2 350 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 MPPED1O15442 326 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 IFNA17P01571 189 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 C9orf152Q5JTZ5 239 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 SPNS3Q6ZMD2 512 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 CALHM1Q8IU99 346 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 OSR2Q8N2R0 312 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 PAPOLGQ9BWT3 736 aaKnown RBP10.26□□□□□ -0.77
UBE3D-206ENST00000505226 ULBP2Q9BZM5 246 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 TMED3Q9Y3Q3 217 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 A0A0J9YW62 118 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 TNFSF11O14788 317 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 ZNHIT1O43257 154 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 SSSCA1O60232 199 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 CST7O76096 145 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 PPYP01298 95 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 CCL3P10147 92 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 NPBWR2P48146 333 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 GNMTQ14749 295 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 ICAM4Q14773 271 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 OR2B11Q5JQS5 317 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 GFI1BQ5VTD9 330 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 CADM4Q8NFZ8 388 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 DOK5Q9P104 306 aa10.26□□□□□ -0.77
UBE3D-206ENST00000505226 TGIF2-C20orf24A0A0A6YYL0 155 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 TRDCB7Z8K6 153 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 NRASP01111 189 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 LCATP04180 440 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 AFF3P51826 1226 aaKnown RBP10.25□□□□□ -0.77
UBE3D-206ENST00000505226 UCP3P55916 312 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 NDUFA6P56556 154 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 RAET1LQ5VY80 246 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 TMEM42Q69YG0 159 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 TMEM252Q8N6L7 170 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 CYB561D1Q8N8Q1 229 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 LFNGQ8NES3 379 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 BORCS8Q96FH0 119 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 HS3ST6Q96QI5 342 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 TMEM222Q9H0R3 208 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 CA14Q9ULX7 337 aa10.25□□□□□ -0.77
UBE3D-206ENST00000505226 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.25□□□□□ -0.77
UBE3D-206ENST00000505226 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.25□□□□□ -0.77
UBE3D-206ENST00000505226 A0A1W2PQM1 296 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms