RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 PARD6GQ9BYG4 376 aaPredicted RBP6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 MAP1LC3BQ9GZQ8 125 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 CACFD1Q9UGQ2 172 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 WASHC3Q9Y3C0 194 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 HS3ST3B1Q9Y662 390 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 A0A1B0GTQ1 180 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 SHISA7A6NL88 538 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 TAAR5O14804 337 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 HCRTR1O43613 425 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 CCL2P13500 99 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 MYOGP15173 224 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 ERVFRD-1P60508 538 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 ZNF684Q5T5D7 378 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 RNASEKQ6P5S7 137 aaKnown RBP6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 SLC25A26Q70HW3 274 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 C19orf47Q8N9M1 422 aaKnown RBP6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 POC1BQ8TC44 478 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 GTF3AQ92664 365 aaKnown RBP6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 RAB37Q96AX2 223 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 ZNF426Q9BUY5 554 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 KLHL42Q9P2K6 505 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 OR51B4Q9Y5P0 310 aa6.89□□□□□ -1.31
ATP2C1-208ENST00000504948 KLF4O43474 513 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 HSBP1O75506 76 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 IGHEP01854 428 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 HIST1H1DP16402 221 aaKnown RBP6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 CHRNB4P30926 498 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 IER3P46695 156 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 HTR5AP47898 357 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 EFNA3P52797 238 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 TAS2R30P59541 319 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 GABREP78334 506 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 ZNF816Q0VGE8 651 aaPredicted RBP6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 TMEM108Q6UXF1 575 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 SPRED2Q7Z698 418 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 BIVMQ86UB2 503 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 DTWD2Q8NBA8 298 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 C11orf40Q8WZ69 217 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 NINJ1Q92982 152 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 RAB7BQ96AH8 199 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 TECTBQ96PL2 329 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 TMEM9BQ9NQ34 198 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 P4HTMQ9NXG6 502 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 SPG11Q96JI7 2443 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 A8MVM7 634 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 IL11P20809 199 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 IGFBP4P22692 258 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 RPS11P62280 158 aaKnown RBP eCLIP6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 CD300LDQ6UXZ3 194 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 TCF23Q7RTU1 214 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 LFNGQ8NES3 379 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 ALG14Q96F25 216 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 GFI1Q99684 422 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 C5orf66Q9H5L9 145 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 MMP25Q9NPA2 562 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 EYSQ5T1H1 3165 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 A0A096LPE4 126 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 A0A1W2PPZ6 126 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 PRSS38A1L453 326 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 PMS2P1A4D2B8 440 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 CLEC18AA5D8T8 446 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 B4DEV8 164 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 COL10A1Q03692 680 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 HTR3DQ70Z44 454 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 RNF144BQ7Z419 303 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 LURAP1LQ8IV03 231 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 CLEC18CQ8NCF0 446 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 OR2T10Q8NGZ9 312 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 SGK494Q96LW2 274 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 FAM117AQ9C073 453 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 MYOTQ9UBF9 498 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 ZNF835Q9Y2P0 537 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 HELZP42694 1942 aaKnown RBP6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 ACACAQ13085 2346 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 PRR14LQ5THK1 2151 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 RALGAPA1Q6GYQ0 2036 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 C3orf80F5H4A9 247 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 ZNF737O75373 536 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 DTYMKP23919 212 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 MMDQ15546 238 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 TMEM241Q24JQ0 296 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 OR1L6Q8NGR2 347 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 TMEM234Q8WY98 164 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 DNAJB12Q9NXW2 375 aaKnown RBP6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 PRSS50Q9UI38 385 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 ST3GAL6Q9Y274 331 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 TP53TG5Q9Y2B4 290 aa6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 STRAPQ9Y3F4 350 aaKnown RBP6.88□□□□□ -1.31
ATP2C1-208ENST00000504948 NAV3Q8IVL0 2385 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 UBE2CO00762 179 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 PAGE4O60829 102 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 RAB7AP51149 207 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 BLKP51451 505 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 ERVFC1-1P60608 527 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 RPS21P63220 83 aaKnown RBP6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 RPL19P84098 196 aaKnown RBP6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 MRPL58Q14197 206 aaKnown RBP6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 KISS1Q15726 138 aa6.87□□□□□ -1.31
ATP2C1-208ENST00000504948 GABRA6Q16445 453 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms