RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 EXOSC2Q13868 293 aaKnown RBP12.24□□□□□ -0.45
TCOF1-207ENST00000504761 ENDOGQ14249 297 aaKnown RBP12.24□□□□□ -0.45
TCOF1-207ENST00000504761 ZNF826PQ6ZT77 177 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 OR5A2Q8NGI9 324 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 CXXC4Q9H2H0 198 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 DLL4Q9NR61 685 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 KLK13Q9UKR3 277 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 DENND4CQ5VZ89 1909 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 GBF1Q92538 1859 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 TRGV10A0A0A0MS01 117 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 IGHMP01871 453 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 ISG15P05161 165 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 OR5AC1P0C628 307 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 UCP2P55851 309 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 CCL8P80075 99 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 SEMA5BQ9P283 1151 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 M0R1X1 148 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 TMEM255AQ5JRV8 349 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 NR2C2APQ86WQ0 139 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 RNF141Q8WVD5 230 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 NPIPB13A6NJU9 1138 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 NPIPB4C9JG80 1138 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 HPNP05981 417 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 FSTP19883 344 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 M6PRP20645 277 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 ZBTB25P24278 435 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 ELLP55199 621 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-207ENST00000504761 C1orf185Q5T7R7 199 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 S1PR3Q99500 378 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 HIPK2Q9H2X6 1198 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 HEATR1Q9H583 2144 aaKnown RBP12.23□□□□□ -0.45
TCOF1-207ENST00000504761 C2orf16Q68DN1 1984 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 LY6G6EA0A0G2JKS1 128 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 J3QT63 122 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 RAG2P55895 527 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 Q0VFX4 171 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 OR2F1Q13607 317 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 ZNF626Q68DY1 528 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 KCNRGQ8N5I3 272 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 EDARADDQ8WWZ3 215 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 ABHD17AQ96GS6 310 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 U3KQA8 63 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 PLXND1Q9Y4D7 1925 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 RPS11P62280 158 aaKnown RBP eCLIP12.23□□□□□ -0.45
TCOF1-207ENST00000504761 FOXO1Q12778 655 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 VWA1Q6PCB0 445 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 SLC38A6Q8IZM9 456 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 SLC35G3Q8N808 338 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 PXT1Q8NFP0 134 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 AMDHD2Q9Y303 409 aa12.23□□□□□ -0.45
TCOF1-207ENST00000504761 OTOGLQ3ZCN5 2332 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 IGHV3OR15-7A0A075B7D8 119 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 ABCD4O14678 606 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 TMPRSS2O15393 492 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 ZNF266Q14584 549 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 OR1K1Q8NGR3 316 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 HPSE2Q8WWQ2 592 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 LIN7CQ9NUP9 197 aaKnown RBP12.22□□□□□ -0.45
TCOF1-207ENST00000504761 KIF26AQ9ULI4 1882 aaPredicted RBP12.22□□□□□ -0.45
TCOF1-207ENST00000504761 RFPL4AA6NLU0 287 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 RFPL4AL1F8VTS6 287 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 SYNGR1O43759 233 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 EIF2S3LQ2VIR3 472 aaKnown RBP12.22□□□□□ -0.45
TCOF1-207ENST00000504761 TMEM211Q6ICI0 200 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 LYG1Q8N1E2 194 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 OR2G3Q8NGZ4 309 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 RPS4Y2Q8TD47 263 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 ONECUT2O95948 504 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 APOA2P02652 100 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 RAB32Q13637 225 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 C10orf128Q5T292 105 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 C19orf48Q6RUI8 117 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 SLC36A1Q7Z2H8 476 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 SCARB1Q8WTV0 552 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 CNTNAP3Q9BZ76 1288 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 SDHAF2Q9NX18 166 aa12.22□□□□□ -0.45
TCOF1-207ENST00000504761 SFT2D2O95562 160 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 CD3EP07766 207 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 EFNB1P98172 346 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 PLAURQ03405 335 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 Q3ZCU0 254 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 ZNF385CQ66K41 422 aaPredicted RBP12.21□□□□□ -0.45
TCOF1-207ENST00000504761 ADAM5Q6NVV9 412 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 ADAD2Q8NCV1 583 aaKnown RBP12.21□□□□□ -0.45
TCOF1-207ENST00000504761 OR1S2Q8NGQ3 325 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 WNT2BQ93097 391 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 RPS10P5Q9NQ39 176 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 ZNF355PQ9NSJ1 428 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 A0A0U1RQK1 487 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 NDUFB3O43676 98 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 OR11H7Q8NGC8 314 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 SFT2D1Q8WV19 159 aa12.21□□□□□ -0.45
TCOF1-207ENST00000504761 MRPL13Q9BYD1 178 aaKnown RBP12.21□□□□□ -0.45
TCOF1-207ENST00000504761 ACACBO00763 2458 aa12.21□□□□□ -0.46
TCOF1-207ENST00000504761 LRRC3CA6NJW4 275 aa12.21□□□□□ -0.46
TCOF1-207ENST00000504761 ADAM20O43506 726 aa12.21□□□□□ -0.46
TCOF1-207ENST00000504761 HAND1O96004 215 aa12.21□□□□□ -0.46
TCOF1-207ENST00000504761 GAS1P54826 345 aa12.21□□□□□ -0.46
TCOF1-207ENST00000504761 TAGLNQ01995 201 aaKnown RBP12.21□□□□□ -0.46
TCOF1-207ENST00000504761 P2RY6Q15077 328 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms