RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SLC22A6Q4U2R8 563 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 NHLRC3Q5JS37 347 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 AWAT2Q6E213 333 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 GLIPR1L1Q6UWM5 242 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 TPRA1Q86W33 373 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 ZNRF1Q8ND25 227 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 OR6M1Q8NGM8 313 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 OR13F1Q8NGS4 319 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 OR10K1Q8NGX5 313 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 RAB40AQ8WXH6 277 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 DACT3Q96B18 629 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 MRPS24Q96EL2 167 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 DMRTB1Q96MA1 342 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 CHCHD6Q9BRQ6 235 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM234AQ9H0X4 552 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 YAE1D1Q9NRH1 226 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 SLC25A10Q9UBX3 287 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 OR5V1Q9UGF6 321 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 KCNS2Q9ULS6 477 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 V9GY05 133 aa9.87□□□□□ -0.83
PDLIM5-208ENST00000504489 FN1P02751 2386 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 KIR2DS1A0A191URI9 304 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 J3QLI3 93 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 ZNF737O75373 536 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 TK1P04183 234 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 TFAP2AP05549 437 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 LIPFP07098 398 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 GTF2F2P13984 249 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 CFPP27918 469 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 HTR2CP28335 458 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 DUSP1P28562 367 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 ALDH3B2P48448 385 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 CAPZA1P52907 286 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 DCAF12L2Q5VW00 463 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 Q6P435 159 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 BTN2A1Q7KYR7 527 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 OSR2Q8N2R0 312 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 FGFRL1Q8N441 504 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 TMEM185AQ8NFB2 350 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 OR5D13Q8NGL4 314 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 ST8SIA4Q92187 359 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 SLC25A28Q96A46 364 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 SNX22Q96L94 193 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 KCTD7Q96MP8 289 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 MMP26Q9NRE1 261 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 TMEM160Q9NX00 188 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 INSIG2Q9Y5U4 225 aa9.86□□□□□ -0.83
PDLIM5-208ENST00000504489 IGHV2-70DA0A0C4DH43 119 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 A0A0G2JMP0 313 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 LOC100506127A0A0U1RQW1 187 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 A0A0X1KG70 313 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 TMEM82A0PJX8 343 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 C22orf46C9J442 243 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 DEGS1O15121 323 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 ENSAO43768 121 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 AIREO43918 545 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 BPNT1O95861 308 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 OR2H2O95918 312 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 NDUFB7P17568 137 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 RAB3BP20337 219 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 SERPINA2P20848 420 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 SNU13P55769 128 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 RBM11P57052 281 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 PAX8Q06710 450 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 PIGYQ3MUY2 71 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 C17orf107Q6ZR85 190 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 Q71RC1 249 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 LINC00596Q86U02 117 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 LURAP1LQ8IV03 231 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 OR8H2Q8N162 312 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 ASCC1Q8N9N2 400 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 CHST4Q8NCG5 386 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 LY6G5BQ8NDX9 201 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 OR4M2Q8NGB6 313 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 C8orf46Q8TAG6 207 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 PPP1R35Q8TAP8 253 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 POM121Q96HA1 1249 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 NUDT16L1Q9BRJ7 211 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 DCTN5Q9BTE1 182 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 CENPOQ9BU64 300 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 FUNDC2Q9BWH2 189 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 SHARPINQ9H0F6 387 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 IFT22Q9H7X7 185 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 PLGRKTQ9HBL7 147 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 RPUSD1Q9UJJ7 312 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 ST3GAL6Q9Y274 331 aa9.85□□□□□ -0.83
PDLIM5-208ENST00000504489 TRBV23-1A0A0A0MS06 115 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 A0A0G2JK05 382 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 A0A1W2PP11 408 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A10PA6NDY2 464 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A18PA6NE21 464 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A16PA6NEW6 464 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A20PA6NIJ5 464 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A8PA6NJQ4 464 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A7PA6NKC0 464 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 IFITM5A6NNB3 132 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A22PA8MWA6 464 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A12PA8MX19 464 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A5PA8MXJ8 464 aa9.84□□□□□ -0.83
PDLIM5-208ENST00000504489 FAM90A23PA8MXZ1 464 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms