RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SIGLEC9Q9Y336 463 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 UBE2J1Q9Y385 318 aaPredicted RBP9.68□□□□□ -0.86
MED28-203ENST00000503945 LINC00312Q9Y6C7 94 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 DEGS1O15121 323 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 MAGEB3O15480 346 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 ALX3O95076 343 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 CSF1P09603 554 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 DBTP11182 482 aaKnown RBP9.67□□□□□ -0.86
MED28-203ENST00000503945 GABRB1P18505 474 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 LMO1P25800 156 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 ZNF91Q05481 1191 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 C2orf68Q2NKX9 166 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 PLA1AQ53H76 456 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 MINOS1Q5TGZ0 78 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 ZNF626Q68DY1 528 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 OR52W1Q6IF63 320 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 CRIP3Q6Q6R5 217 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 SAXO1Q8IYX7 474 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 TPRX1Q8N7U7 411 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 ZNF555Q8NEP9 628 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 OR51A4Q8NGJ6 313 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 OR13C9Q8NGT0 318 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 OR5AK2Q8NH90 309 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 FAM110DQ8TAY7 271 aaPredicted RBP9.67□□□□□ -0.86
MED28-203ENST00000503945 HAVCR2Q8TDQ0 301 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 STMN2Q93045 179 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 RFT1Q96AA3 541 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 COMMD4Q9H0A8 199 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 ISG20L2Q9H9L3 353 aaKnown RBP9.67□□□□□ -0.86
MED28-203ENST00000503945 EXOSC4Q9NPD3 245 aaKnown RBP9.67□□□□□ -0.86
MED28-203ENST00000503945 ERVK13-1Q9NX77 482 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 HILPDAQ9Y5L2 63 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 SESN1Q9Y6P5 492 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 MINOS1-NBL1R4GNA1 71 aa9.67□□□□□ -0.86
MED28-203ENST00000503945 TRGV10A0A0A0MS01 117 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 TMEM212A6NML5 194 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 ODF3BA8MYP8 253 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 SIRPB1O00241 398 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 PEX14O75381 377 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 KDM4BO94953 1096 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 ZFPL1O95159 310 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 OR2H2O95918 312 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 HCKP08631 526 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 CCDC159P0C7I6 412 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 VSIG10L2P0DP72 767 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 EFNB2P52799 333 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 P2RX3P56373 397 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 SLC34A1Q06495 639 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 KISS1Q15726 138 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 DYNAPQ8N1N2 210 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 ABHD12Q8N2K0 398 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 PARP16Q8N5Y8 322 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 ZNF565Q8N9K5 539 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 CHST4Q8NCG5 386 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 OR5D18Q8NGL1 313 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 OR10AC1Q8NH08 325 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 NDNFQ8TB73 568 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 CORO2AQ92828 525 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 SPACA5Q96QH8 159 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 CLEC7AQ9BXN2 247 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 TMEM133Q9H2Q1 129 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 GAL3ST2Q9H3Q3 398 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 MRPS18AQ9NVS2 196 aaKnown RBP9.66□□□□□ -0.86
MED28-203ENST00000503945 IL36RNQ9UBH0 155 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 DHDHQ9UQ10 334 aa9.66□□□□□ -0.86
MED28-203ENST00000503945 IGHV2-26A0A0B4J1V2 119 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 IGKV1-12A0A0C4DH73 117 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 TSPAN15O95858 294 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 IGKV1D-12P01611 117 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 ZNF44P15621 663 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 HTR1DP28221 377 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 OR3A1P47881 315 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 DYNLT3P51808 116 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 PRRX1P54821 245 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 EMX1Q04741 257 aaPredicted RBP9.65□□□□□ -0.86
MED28-203ENST00000503945 AESQ08117 197 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 IL18R1Q13478 541 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 CCBE1Q6UXH8 406 aaPredicted RBP9.65□□□□□ -0.86
MED28-203ENST00000503945 RTN4RL2Q86UN3 420 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 SATL1Q86VE3 508 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 PQLC1Q8N2U9 271 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 OR52I1Q8NGK6 324 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 TSEN15Q8WW01 171 aaKnown RBP9.65□□□□□ -0.86
MED28-203ENST00000503945 CPNE2Q96FN4 548 aaPredicted RBP9.65□□□□□ -0.86
MED28-203ENST00000503945 PDCD1LG2Q9BQ51 273 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 PRSS22Q9GZN4 317 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 TAS2R3Q9NYW6 316 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 FOXJ3Q9UPW0 622 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 TCF19Q9Y242 345 aa9.65□□□□□ -0.86
MED28-203ENST00000503945 A6NDX4 124 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 E9PI62 339 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 F2RL2O00254 374 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 TOR1AO14656 332 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 SULT1B1O43704 296 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 CHST1O43916 411 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 RAB3AP20336 220 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 DCKP27707 260 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 BRS3P32247 399 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 GLIPR1P48060 266 aa9.64□□□□□ -0.87
MED28-203ENST00000503945 CCDC58Q4VC31 144 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms