RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 LMO1P25800 156 aa14.98□□□□□ -0.01
PDLIM7-209ENST00000503346 TRAM1Q15629 374 aa14.98□□□□□ -0.01
PDLIM7-209ENST00000503346 TMEM200BQ69YZ2 307 aa14.98□□□□□ -0.01
PDLIM7-209ENST00000503346 METAP1DQ6UB28 335 aaPredicted RBP14.98□□□□□ -0.01
PDLIM7-209ENST00000503346 LYPD6Q86Y78 171 aa14.98□□□□□ -0.01
PDLIM7-209ENST00000503346 BCL6BQ8N143 479 aaPredicted RBP14.98□□□□□ -0.01
PDLIM7-209ENST00000503346 A0A1W2PPH5 198 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 OR2H2O95918 312 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 GABRR1P24046 479 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 PSMA1P25786 263 aaKnown RBP14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 GP2P55259 537 aaKnown RBP14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 HILS1P60008 231 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 EMX1Q04741 257 aaPredicted RBP14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 RSU1Q15404 277 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 Q6P435 159 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 GDPD3Q7L5L3 318 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 CEACAM19Q7Z692 300 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 PHC2Q8IXK0 858 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 NKAIN3Q8N8D7 197 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 CHST4Q8NCG5 386 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 OR4M1Q8NGD0 313 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 OR51T1Q8NGJ9 327 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 PPP1R35Q8TAP8 253 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 LHX4Q969G2 390 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 METTL9Q9H1A3 318 aa14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 METTL8Q9H825 291 aaKnown RBP14.97□□□□□ -0.01
PDLIM7-209ENST00000503346 FBN1P35555 2871 aaKnown RBP14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 IGHV1-69DA0A0B4J2H0 117 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 MEGF11A6BM72 1044 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 SIRPB1O00241 398 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 MGST3O14880 152 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 ZNF780AO75290 641 aaPredicted RBP14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 CDRT1O95170 752 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 VENTXO95231 258 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 IGHV1-69P01742 117 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 MAS1P04201 325 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 UCHL1P09936 223 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 PRTN3P24158 256 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 OR3A1P47881 315 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 RPS25P62851 125 aaKnown RBP14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 BLMHQ13867 455 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 IL13RA2Q14627 380 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 GRK1Q15835 563 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 FAM27D1Q5T7N8 215 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 BRD3OSQ6XYD6 125 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 SVOPQ8N4V2 548 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 JAGN1Q8N5M9 183 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 OR4S1Q8NGB4 309 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 OR10K1Q8NGX5 313 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 PHYHIPQ92561 330 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 TNFRSF14Q92956 283 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 TMEM203Q969S6 136 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 CHST6Q9GZX3 395 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 SIRT7Q9NRC8 400 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 ING4Q9UNL4 249 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 SF3B6Q9Y3B4 125 aaKnown RBP14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 LRRC42Q9Y546 428 aa14.96□□□□□ -0.01
PDLIM7-209ENST00000503346 ATRQ13535 2644 aa14.96□□□□□ -0.02
PDLIM7-209ENST00000503346 A0A0G2JK05 382 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 RGS9O75916 674 aaPredicted RBP14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 ZNF44P15621 663 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 ERP29P30040 261 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 EDDM3BP56851 147 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 SRSF2Q01130 221 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 MEF2CQ06413 473 aaPredicted RBP14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 ZNF273Q14593 569 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 NHLRC3Q5JS37 347 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 RUSC1-AS1Q66K80 236 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 TMEM91Q6ZNR0 172 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 SPARTQ8N0X7 666 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 TMEM158Q8WZ71 300 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 MUL1Q969V5 352 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 ZNF48Q96MX3 618 aaPredicted RBP14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 JMJD8Q96S16 334 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 S100A13Q99584 98 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 MDFIQ99750 246 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 UQCC2Q9BRT2 126 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 PPIL3Q9H2H8 161 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 TCF7L1Q9HCS4 588 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 PCDHB16Q9NRJ7 776 aa14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 SOX21Q9Y651 276 aaPredicted RBP14.95□□□□□ -0.02
PDLIM7-209ENST00000503346 RNASEK-C17orf49H0YIS7 233 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 SLC33A1O00400 549 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 DEGS1O15121 323 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 HTR3BO95264 441 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 CSN2P05814 226 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 GABRA5P31644 462 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 GPR176Q14439 515 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 EDDM3AQ14507 147 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 KRTAP24-1Q3LI83 254 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 HSD17B12Q53GQ0 312 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 UBE2UQ5VVX9 321 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 NCR3LG1Q68D85 454 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 RBMS3Q6XE24 437 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 LRRTM1Q86UE6 522 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 OSR2Q8N2R0 312 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 C11orf42Q8N5U0 333 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 SIGLECL1Q8N7X8 197 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 PRDM13Q9H4Q3 707 aa14.94□□□□□ -0.02
PDLIM7-209ENST00000503346 hADV38S2A0JD32 116 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms