RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 UFD1Q92890 307 aa4.3□□□□□ -1.72
NEDD4-203ENST00000502612 EFHD2Q96C19 240 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-203ENST00000502612 IMMP1LQ96LU5 166 aa4.3□□□□□ -1.72
NEDD4-203ENST00000502612 RBM14Q96PK6 669 aaKnown RBP4.3□□□□□ -1.72
NEDD4-203ENST00000502612 TSSK6Q9BXA6 273 aa4.3□□□□□ -1.72
NEDD4-203ENST00000502612 SLC19A3Q9BZV2 496 aa4.3□□□□□ -1.72
NEDD4-203ENST00000502612 NAA50Q9GZZ1 169 aaKnown RBP4.3□□□□□ -1.72
NEDD4-203ENST00000502612 FGF20Q9NP95 211 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-203ENST00000502612 MAT2BQ9NZL9 334 aa4.3□□□□□ -1.72
NEDD4-203ENST00000502612 SLC35A3Q9Y2D2 325 aa4.3□□□□□ -1.72
NEDD4-203ENST00000502612 BPTFQ12830 3046 aa4.3□□□□□ -1.72
NEDD4-203ENST00000502612 CEP350Q5VT06 3117 aa4.3□□□□□ -1.72
NEDD4-203ENST00000502612 PIKFYVEQ9Y2I7 2098 aa4.3□□□□□ -1.72
NEDD4-203ENST00000502612 A0A075B6Q4 140 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 IGHV1OR21-1A0A087WYE8 117 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 LOC100506127A0A0U1RQW1 187 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 RIIAD1A6NNX1 92 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 YKT6O15498 198 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 FCMRO60667 390 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 RDH16O75452 317 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 SCGNO76038 276 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 KCNK2O95069 426 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 SNX4O95219 450 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 IGF2P01344 180 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 APOA1P02647 267 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 IFNA16P05015 189 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 ZNF3P17036 446 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 GADD45AP24522 165 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 CALCRP30988 508 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 TGFBR2P37173 567 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 CXCL12P48061 93 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 DUSP3P51452 185 aaPredicted RBP4.29□□□□□ -1.72
NEDD4-203ENST00000502612 CTBP2P56545 445 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 LSM3P62310 102 aaKnown RBP4.29□□□□□ -1.72
NEDD4-203ENST00000502612 ACTC1P68032 377 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 ACTA1P68133 377 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 TLE4Q04727 773 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 PRKCDQ05655 676 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 FUT5Q11128 374 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 OR1Q1Q15612 314 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 ZNF141Q15928 474 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 PGGHGQ32M88 737 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 TRMT12Q53H54 448 aaKnown RBP4.29□□□□□ -1.72
NEDD4-203ENST00000502612 MRPL2Q5T653 305 aaKnown RBP4.29□□□□□ -1.72
NEDD4-203ENST00000502612 TMEM236Q5W0B7 351 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 OTPQ5XKR4 325 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 SMARCD3Q6STE5 483 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 ZNF836Q6ZNA1 936 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 ZNF620Q6ZNG0 422 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 RTL4Q6ZR62 310 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 Q6ZS52 159 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 RBM45Q8IUH3 476 aaKnown RBP4.29□□□□□ -1.72
NEDD4-203ENST00000502612 RDH10Q8IZV5 341 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 FTMTQ8N4E7 242 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 OR52R1Q8NGF1 315 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 OR4D11Q8NGI4 311 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 OR6Q1Q8NGQ2 317 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 OR52N1Q8NH53 320 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 DNAJA4Q8WW22 397 aaPredicted RBP4.29□□□□□ -1.72
NEDD4-203ENST00000502612 UCN3Q969E3 161 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 ZNF285Q96NJ3 590 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 NRTNQ99748 197 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 CCDC32Q9BV29 185 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 SLC7A5P2Q9GIP4 190 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 DSN1Q9H410 356 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 NARFLQ9H6Q4 476 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 RNF167Q9H6Y7 350 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 NDUFB11Q9NX14 153 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 V9GY05 133 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 MYOFQ9NZM1 2061 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 TICRRQ7Z2Z1 1910 aa4.29□□□□□ -1.72
NEDD4-203ENST00000502612 IGHV3OR16-13A0A075B7E8 117 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 ARPC4-TTLL3A0A0A6YYG9 625 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 A0A0G2JLM5 398 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 PSMB11A5LHX3 300 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 ZNF860A6NHJ4 632 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 METTL15A6NJ78 407 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 ZNF670-ZNF695F2Z2N8 137 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 HCRTR1O43613 425 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 OR2B3O76000 313 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 EPPINO95925 133 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 SERPINA3P01011 423 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 CSTAP01040 98 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 PTHP01270 115 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 HLA-DPB1P04440 258 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 IFI30P13284 250 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 F8A1P23610 371 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 CD1BP29016 333 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 CD1CP29017 333 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 HOXA6P31267 233 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 RORAP35398 523 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 TAGLN2P37802 199 aaKnown RBP4.28□□□□□ -1.72
NEDD4-203ENST00000502612 PPICP45877 212 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 PRPS1P60891 318 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 NCS1P62166 190 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 PSG7Q13046 419 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 MRPL28Q13084 256 aaKnown RBP4.28□□□□□ -1.72
NEDD4-203ENST00000502612 AQP6Q13520 282 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
NEDD4-203ENST00000502612 HSDL2Q6YN16 418 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms