RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 ZNF738Q8NE65 137 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 OR2M7Q8NG81 312 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 OR2Z1Q8NG97 314 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 OR4K17Q8NGC6 315 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 OR2AE1Q8NHA4 323 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 CCDC12Q8WUD4 166 aaPredicted RBP1.13□□□□□ -2.23
VPS26A-208ENST00000497022 HGDQ93099 445 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 ITFG2Q969R8 447 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 LRRC45Q96CN5 670 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 ZMYND19Q96E35 227 aaPredicted RBP1.13□□□□□ -2.23
VPS26A-208ENST00000497022 QKIQ96PU8 341 aaKnown RBP eCLIP1.13□□□□□ -2.23
VPS26A-208ENST00000497022 SPACA5Q96QH8 159 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 OR2M4Q96R27 311 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 METTL26Q96S19 204 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 MRPL20Q9BYC9 149 aaKnown RBP1.13□□□□□ -2.23
VPS26A-208ENST00000497022 TBL1XR1Q9BZK7 514 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 NXF2Q9GZY0 626 aaKnown RBP1.13□□□□□ -2.23
VPS26A-208ENST00000497022 ZSCAN16Q9H4T2 348 aaPredicted RBP1.13□□□□□ -2.23
VPS26A-208ENST00000497022 METTL8Q9H825 291 aaKnown RBP1.13□□□□□ -2.23
VPS26A-208ENST00000497022 TAS2R5Q9NYW4 299 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 STX18Q9P2W9 335 aaKnown RBP1.13□□□□□ -2.23
VPS26A-208ENST00000497022 C15orf41Q9Y2V0 281 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 SNX24Q9Y343 169 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 USH1CQ9Y6N9 552 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 URGCP-MRPS24S4R325 110 aa1.13□□□□□ -2.23
VPS26A-208ENST00000497022 USP42Q9H9J4 1324 aaKnown RBP1.13□□□□□ -2.23
VPS26A-208ENST00000497022 CHD2O14647 1828 aaKnown RBP1.12□□□□□ -2.23
VPS26A-208ENST00000497022 DOCK6Q96HP0 2047 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 LOC102724200A0A096LPH7 203 aaPredicted RBP1.12□□□□□ -2.23
VPS26A-208ENST00000497022 IGHV1-3A0A0C4DH29 117 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 A0A0G2JMP0 313 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 A0A0X1KG70 313 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 A0A1B0GTI1 187 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 A0A1B0GX12 115 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 TMEM72A0PK05 275 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 GOLGA8IPA6NC78 632 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 RBFOX3A6NFN3 312 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 CLDN34H7C241 214 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 UPK2O00526 184 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 UBDO15205 165 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 FABP7O15540 132 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 SCN2BO60939 215 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 SCO1O75880 301 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 CDK14O94921 469 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 TNFAIP8O95379 198 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 RLN2P04090 185 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 MAS1P04201 325 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 CDK1P06493 297 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 SNRPAP09012 282 aaKnown RBP1.12□□□□□ -2.23
VPS26A-208ENST00000497022 OR4Q2P0C623 313 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 NELFEP18615 380 aaKnown RBP1.12□□□□□ -2.23
VPS26A-208ENST00000497022 TEAD1P28347 426 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 KDELR2P33947 212 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 RPA3P35244 121 aaPredicted RBP1.12□□□□□ -2.23
VPS26A-208ENST00000497022 HTR2BP41595 481 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 GCLMP48507 274 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 ACOT2P49753 483 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 XKP51811 444 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 CMC4P56277 68 aaPredicted RBP1.12□□□□□ -2.23
VPS26A-208ENST00000497022 OR10A3P58181 314 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 TAS2R43P59537 309 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 SKP1P63208 163 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 CD164Q04900 197 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 SLAMF1Q13291 335 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 FLOT2Q14254 428 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 IHHQ14623 411 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 TRIP13Q15645 432 aaPredicted RBP1.12□□□□□ -2.23
VPS26A-208ENST00000497022 CEACAM21Q3KPI0 293 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 LINC00303Q3SY05 128 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 ZNF404Q494X3 552 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 RBM48Q5RL73 367 aaKnown RBP1.12□□□□□ -2.23
VPS26A-208ENST00000497022 KCTD16Q68DU8 428 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 FAM173BQ6P4H8 233 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 SSX7Q7RTT5 188 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 SPATA24Q86W54 205 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 LRRC6Q86X45 466 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 PDPNQ86YL7 162 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 FAM9CQ8IZT9 166 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 ORMDL3Q8N138 153 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 RNF10Q8N5U6 811 aaKnown RBP1.12□□□□□ -2.23
VPS26A-208ENST00000497022 ACBD4Q8NC06 268 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 OR7G1Q8NGA0 311 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 ORAOV1Q8WV07 137 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 C22orf15Q8WYQ4 148 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 CCL17Q92583 94 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 TNFRSF14Q92956 283 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 C8orf76Q96K31 380 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 SMIM8Q96KF7 97 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 BIRC8Q96P09 236 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 MARVELD1Q9BSK0 173 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 API5Q9BZZ5 524 aaKnown RBP1.12□□□□□ -2.23
VPS26A-208ENST00000497022 NDEL1Q9GZM8 345 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 SRRQ9GZT4 340 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 ASB7Q9H672 318 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 SND1-IT1Q9HBX3 110 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 ABCB9Q9NP78 766 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 SDHAF3Q9NRP4 125 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 CA10Q9NS85 328 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 EURLQ9NYK6 297 aa1.12□□□□□ -2.23
VPS26A-208ENST00000497022 UBAP1Q9NZ09 502 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms