RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ARGFXA6NJG6 315 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 FOXI3A8MTJ6 420 aaPredicted RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 FAM220BPB1ANY3 271 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 C12orf77C9JDV5 145 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 AZIN1O14977 448 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 SRP72O76094 671 aaKnown RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 SERPINA1P01009 418 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 APOEP02649 317 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 AMBPP02760 352 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 TYMSP04818 313 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 ISG15P05161 165 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 PATE4P0C8F1 98 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 PRB4P10163 310 aaPredicted RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 CD37P11049 281 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 GGT1P19440 569 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 CELP19835 753 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 ANOS1P23352 680 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 ME2P23368 584 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 HTR1DP28221 377 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 TGFBR2P37173 567 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 KIR2DS2P43631 304 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 DLX1P56177 255 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 DLX6P56179 175 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 AP1S2P56377 157 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 OR12D2P58182 307 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 RAP1BP61224 184 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 NUTF2P61970 127 aaKnown RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 SRPXP78539 464 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 FKBP3Q00688 224 aaKnown RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 PRPSAP1Q14558 356 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 ZNF146Q15072 292 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 TAF1AQ15573 450 aaPredicted RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 POU2AF1Q16633 256 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 TMEM176BQ3YBM2 270 aaPredicted RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 AKIRIN2Q53H80 203 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 SPIN4Q56A73 249 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 OGFRL1Q5TC84 451 aaPredicted RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 MARC1Q5VT66 337 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 HACD4Q5VWC8 232 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 ZNF530Q6P9A1 599 aaPredicted RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 CXCL17Q6UXB2 119 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 CCDC121Q6ZUS5 278 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 TMEM179Q6ZVK1 233 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 TMEM135Q86UB9 458 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 ZNF329Q86UD4 541 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 PPP1R27Q86WC6 154 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 C17orf82Q86X59 251 aaPredicted RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 GAPTQ8N292 157 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 PIGXQ8TBF5 258 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 PIFOQ8TCI5 191 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 TAF15Q92804 592 aaKnown RBP eCLIP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 PPWD1Q96BP3 646 aaKnown RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 FGGYQ96C11 551 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 ZMYND19Q96E35 227 aaPredicted RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 VAT1Q99536 393 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 EBNA1BP2Q99848 306 aaKnown RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 TMEM208Q9BTX3 173 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 UGT1A7Q9HAW7 530 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 UGT1A8Q9HAW9 530 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 ABCB9Q9NP78 766 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 SPHK2Q9NRA0 654 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 TAS2R13Q9NYV9 303 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 OR1A1Q9P1Q5 309 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 STOML2Q9UJZ1 356 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 V9GY05 133 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 V9GYQ6 96 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 FSIP2Q5CZC0 6907 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 FANCIQ9NVI1 1328 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 DOCK1Q14185 1865 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 HELZP42694 1942 aaKnown RBP2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 SEC16AO15027 2179 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 POLEQ07864 2286 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 CSMD3Q7Z407 3707 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 IGLV1-36A0A0B4J1U3 117 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 FAM240AA0A1B0GVK7 77 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 SMIM1B2RUZ4 78 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 PFDN6O15212 129 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 FABP7O15540 132 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 CRXO43186 299 aaPredicted RBP2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 HCRTR1O43613 425 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 SNAP91O60641 907 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 CTNSO60931 367 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 CTDNEP1O95476 244 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 KLF8O95600 359 aaPredicted RBP2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 IGKV1D-16P01601 117 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 RLN2P04090 185 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 IFNA16P05015 189 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 BCHEP06276 602 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 IGLL1P15814 213 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 ZNF17P17021 662 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 ATF6P18850 670 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 VDAC1P21796 283 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 PRKACGP22612 351 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 IGHV1-2P23083 117 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 PSMA1P25786 263 aaKnown RBP2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 NTSP30990 170 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 BTCP35070 178 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 SPRP35270 261 aaPredicted RBP2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 SERPINB5P36952 375 aa2.82□□□□□ -1.96
EXOSC3-208ENST00000496910 CEACAM6P40199 344 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms