RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 BANF2Q9H503 90 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 LIN7BQ9HAP6 207 aa7.29□□□□□ -1.24
U2AF1-212ENST00000496462 RBBP9O75884 186 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 ACAA1P09110 424 aaPredicted RBP7.28□□□□□ -1.24
U2AF1-212ENST00000496462 GSTP1P09211 210 aaKnown RBP7.28□□□□□ -1.24
U2AF1-212ENST00000496462 PGA5P0DJD9 388 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 CFHR2P36980 270 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 MEF2CQ06413 473 aaPredicted RBP7.28□□□□□ -1.24
U2AF1-212ENST00000496462 PYDC2Q56P42 97 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 WDR82Q6UXN9 313 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 EDARADDQ8WWZ3 215 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 BPESC1Q9GZL8 116 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 IL36GQ9NZH8 169 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 CCDC59Q9P031 241 aaKnown RBP7.28□□□□□ -1.24
U2AF1-212ENST00000496462 MYEF2Q9P2K5 600 aaKnown RBP7.28□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF221Q9UK13 617 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 CSPG4Q6UVK1 2322 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 FABP12A6NFH5 140 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 J3QLI3 93 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 NOS1APO75052 506 aaPredicted RBP7.28□□□□□ -1.24
U2AF1-212ENST00000496462 IGHV4-39P01824 125 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 TK1P04183 234 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 KRTAP10-9P60411 292 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 PNLIPRP3Q17RR3 467 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 ACTBL2Q562R1 376 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF57Q68EA5 555 aaPredicted RBP7.28□□□□□ -1.24
U2AF1-212ENST00000496462 SPNS3Q6ZMD2 512 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 OR5T2Q8NGG2 359 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 NRGNQ92686 78 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 COX4I2Q96KJ9 171 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 PGLYRP3Q96LB9 341 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 OCSTAMPQ9BR26 566 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 CNTD2Q9H8S5 307 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 IGHV3OR15-7A0A075B7D8 119 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 PPIAL4CA0A0B4J2A2 164 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 FAM172BPA6NC97 362 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 RNF223E7ERA6 249 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 GABARAPO95166 117 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 CRYBA1P05813 215 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 PPIAL4GP0DN37 164 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 OR3A4PP47883 348 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 C2orf76Q3KRA6 126 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 XAF1Q6GPH4 301 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 LRRC28Q86X40 367 aaPredicted RBP7.28□□□□□ -1.24
U2AF1-212ENST00000496462 BPIFB2Q8N4F0 458 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 OR51A4Q8NGJ6 313 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 C10orf105Q8TEF2 133 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 FCAMRQ8WWV6 532 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 PTX4Q96A99 478 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF319Q9P2F9 582 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 SPATA2Q9UM82 520 aa7.28□□□□□ -1.24
U2AF1-212ENST00000496462 PRRC2AP48634 2157 aaKnown RBP7.28□□□□□ -1.24
U2AF1-212ENST00000496462 FAM221AA4D161 298 aa7.27□□□□□ -1.24
U2AF1-212ENST00000496462 SYNGR1O43759 233 aa7.27□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF205O95201 554 aa7.27□□□□□ -1.24
U2AF1-212ENST00000496462 LALBAP00709 142 aa7.27□□□□□ -1.24
U2AF1-212ENST00000496462 COL8A2P25067 703 aa7.27□□□□□ -1.24
U2AF1-212ENST00000496462 COL10A1Q03692 680 aa7.27□□□□□ -1.24
U2AF1-212ENST00000496462 C1orf100Q5SVJ3 147 aa7.27□□□□□ -1.24
U2AF1-212ENST00000496462 PRSS45Q7RTY3 260 aa7.27□□□□□ -1.24
U2AF1-212ENST00000496462 ACBD4Q8NC06 268 aa7.27□□□□□ -1.24
U2AF1-212ENST00000496462 RNASE11Q8TAA1 199 aaKnown RBP7.27□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF418Q8TF45 676 aaPredicted RBP7.27□□□□□ -1.24
U2AF1-212ENST00000496462 EXTL2Q9UBQ6 330 aa7.27□□□□□ -1.24
U2AF1-212ENST00000496462 APCP25054 2843 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 CEACAM18A8MTB9 384 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 DISC1C4P0D8 188 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 MLNRO43193 412 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 ALDH3B2P48448 385 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 GP2P55259 537 aaKnown RBP7.27□□□□□ -1.25
U2AF1-212ENST00000496462 RBM11P57052 281 aaKnown RBP7.27□□□□□ -1.25
U2AF1-212ENST00000496462 TAS2R46P59540 309 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 SEC61A1P61619 476 aaKnown RBP7.27□□□□□ -1.25
U2AF1-212ENST00000496462 RSPO1Q2MKA7 263 aaPredicted RBP7.27□□□□□ -1.25
U2AF1-212ENST00000496462 OR8H2Q8N162 312 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 GCSAMQ8N6F7 178 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 NANPQ8TBE9 248 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 DPCDQ9BVM2 203 aaPredicted RBP7.27□□□□□ -1.25
U2AF1-212ENST00000496462 C12orf4Q9NQ89 552 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 AUP1Q9Y679 476 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 TLN2Q9Y4G6 2542 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 ARHGAP21Q5T5U3 1957 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 PRR14LQ5THK1 2151 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 SMIM30A4D0T7 59 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 HSPB6O14558 160 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 SRSF10O75494 262 aaKnown RBP7.27□□□□□ -1.25
U2AF1-212ENST00000496462 NFYBP25208 207 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 BRS3P32247 399 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 NCS1P62166 190 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 MPPED2Q15777 294 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 PYHIN1Q6K0P9 492 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 ZNF596Q8TC21 504 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 LGALS14Q8TCE9 139 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 ISOC1Q96CN7 298 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 DMRTB1Q96MA1 342 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 CADP27708 2225 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 C2CD3Q4AC94 2353 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 POM121CA8CG34 1229 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 LYNX1G3V0Z9 82 aa7.27□□□□□ -1.25
U2AF1-212ENST00000496462 LMX1BO60663 402 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms