RNA–Protein interactions for RNA: ENST00000496298.5

USP40-217, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-217ENST00000496298 TIMM23O14925 209 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 SULT1B1O43704 296 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 OCM2P0CE71 109 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 OCMP0CE72 109 aaPredicted RBP15.7■□□□□ 0.1
USP40-217ENST00000496298 PAX6P26367 422 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 DCKP27707 260 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 KIR2DS4P43632 304 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 ZP1P60852 638 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 EDDM3AQ14507 147 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 CCDC58Q4VC31 144 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 LDLRAD2Q5SZI1 272 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 ZNF691Q5VV52 312 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 ASPHD2Q6ICH7 369 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 LIAT1Q6ZQX7 453 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 RPS4Y2Q8TD47 263 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 MALSU1Q96EH3 234 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 CHST6Q9GZX3 395 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 RAB18Q9NP72 206 aa15.7■□□□□ 0.1
USP40-217ENST00000496298 UBE2J1Q9Y385 318 aaPredicted RBP15.7■□□□□ 0.1
USP40-217ENST00000496298 MEX3AA1L020 520 aaKnown RBP15.69■□□□□ 0.1
USP40-217ENST00000496298 OR2H2O95918 312 aa15.69■□□□□ 0.1
USP40-217ENST00000496298 CALCBP10092 127 aa15.69■□□□□ 0.1
USP40-217ENST00000496298 P2RX3P56373 397 aa15.69■□□□□ 0.1
USP40-217ENST00000496298 KISS1Q15726 138 aa15.69■□□□□ 0.1
USP40-217ENST00000496298 RPL22L1Q6P5R6 122 aaKnown RBP15.69■□□□□ 0.1
USP40-217ENST00000496298 TPRX1Q8N7U7 411 aa15.69■□□□□ 0.1
USP40-217ENST00000496298 CORO2AQ92828 525 aa15.69■□□□□ 0.1
USP40-217ENST00000496298 STMN2Q93045 179 aa15.69■□□□□ 0.1
USP40-217ENST00000496298 FOXRED1Q96CU9 486 aaPredicted RBP15.69■□□□□ 0.1
USP40-217ENST00000496298 CDCA4Q9BXL8 241 aa15.69■□□□□ 0.1
USP40-217ENST00000496298 RANBP3Q9H6Z4 567 aaPredicted RBP15.69■□□□□ 0.1
USP40-217ENST00000496298 EXOSC4Q9NPD3 245 aaKnown RBP15.69■□□□□ 0.1
USP40-217ENST00000496298 C8orf4Q9NR00 106 aa15.69■□□□□ 0.1
USP40-217ENST00000496298 DHDHQ9UQ10 334 aa15.69■□□□□ 0.1
USP40-217ENST00000496298 GSTK1Q9Y2Q3 226 aa15.69■□□□□ 0.1
USP40-217ENST00000496298 SESN1Q9Y6P5 492 aa15.69■□□□□ 0.1
USP40-217ENST00000496298 M0QZ24 198 aa15.68■□□□□ 0.1
USP40-217ENST00000496298 ARG1P05089 322 aa15.68■□□□□ 0.1
USP40-217ENST00000496298 CSN2P05814 226 aa15.68■□□□□ 0.1
USP40-217ENST00000496298 ETV1P50549 477 aa15.68■□□□□ 0.1
USP40-217ENST00000496298 GTF2A1P52655 376 aaPredicted RBP15.68■□□□□ 0.1
USP40-217ENST00000496298 LY6EQ16553 131 aa15.68■□□□□ 0.1
USP40-217ENST00000496298 ELP2Q6IA86 826 aa15.68■□□□□ 0.1
USP40-217ENST00000496298 Q6P435 159 aa15.68■□□□□ 0.1
USP40-217ENST00000496298 PACRGLQ8N7B6 248 aa15.68■□□□□ 0.1
USP40-217ENST00000496298 CHST4Q8NCG5 386 aa15.68■□□□□ 0.1
USP40-217ENST00000496298 OR5D18Q8NGL1 313 aa15.68■□□□□ 0.1
USP40-217ENST00000496298 RGP1Q92546 391 aaPredicted RBP15.68■□□□□ 0.1
USP40-217ENST00000496298 PCDHGB5Q9Y5G0 923 aa15.68■□□□□ 0.1
USP40-217ENST00000496298 A0A0G2JK05 382 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 SIRPB1O00241 398 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 HCKP08631 526 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 GABRA5P31644 462 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 DYNLT3P51808 116 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 EFNB2P52799 333 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 SNU13P55769 128 aaKnown RBP15.67■□□□□ 0.1
USP40-217ENST00000496298 ADARB1P78563 741 aaKnown RBP15.67■□□□□ 0.1
USP40-217ENST00000496298 IL18R1Q13478 541 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 CDK5R1Q15078 307 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 MINOS1Q5TGZ0 78 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 TTC23Q5W5X9 447 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 C11orf88Q6PI97 169 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 Q8NFD4 153 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 PXT1Q8NFP0 134 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 TMEM133Q9H2Q1 129 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 TCF7L1Q9HCS4 588 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 DIMT1Q9UNQ2 313 aaKnown RBP15.67■□□□□ 0.1
USP40-217ENST00000496298 MINOS1-NBL1R4GNA1 71 aa15.67■□□□□ 0.1
USP40-217ENST00000496298 IGHV2-26A0A0B4J1V2 119 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 IRGMA1A4Y4 181 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 FUOMA2VDF0 154 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 OGG1O15527 345 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 CHST1O43916 411 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 CLIC3O95833 236 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 TMEM225BP0DP42 221 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 MTNR1BP49286 362 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 XAF1Q6GPH4 301 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 ASCL4Q6XD76 172 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 TMPRSS11AQ6ZMR5 421 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 DTX3Q8N9I9 347 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 OR4C13Q8NGP0 309 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 CNIH3Q8TBE1 160 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 GPR148Q8TDV2 347 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 TSEN15Q8WW01 171 aaKnown RBP15.66■□□□□ 0.1
USP40-217ENST00000496298 TAS2R3Q9NYW6 316 aa15.66■□□□□ 0.1
USP40-217ENST00000496298 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.66■□□□□ 0.1
USP40-217ENST00000496298 SLC33A1O00400 549 aaPredicted RBP15.65■□□□□ 0.1
USP40-217ENST00000496298 MMP23AO75900 390 aa15.65■□□□□ 0.1
USP40-217ENST00000496298 RAB3AP20336 220 aa15.65■□□□□ 0.1
USP40-217ENST00000496298 SSX2Q16385 188 aa15.65■□□□□ 0.1
USP40-217ENST00000496298 OR2G6Q5TZ20 316 aa15.65■□□□□ 0.1
USP40-217ENST00000496298 HEPN1Q6WQI6 88 aa15.65■□□□□ 0.1
USP40-217ENST00000496298 CPNE2Q96FN4 548 aaPredicted RBP15.65■□□□□ 0.1
USP40-217ENST00000496298 CLEC7AQ9BXN2 247 aa15.65■□□□□ 0.1
USP40-217ENST00000496298 MMP27Q9H306 513 aa15.65■□□□□ 0.1
USP40-217ENST00000496298 BABAM2Q9NXR7 383 aa15.65■□□□□ 0.1
USP40-217ENST00000496298 TCF19Q9Y242 345 aa15.65■□□□□ 0.1
USP40-217ENST00000496298 SIRT4Q9Y6E7 314 aaPredicted RBP15.65■□□□□ 0.1
USP40-217ENST00000496298 TRGV10A0A0A0MS01 117 aa15.64■□□□□ 0.09
USP40-217ENST00000496298 A6NDX4 124 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms