RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 GCNT2Q8N0V5 402 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 FBXL14Q8N1E6 418 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 NAXEQ8NCW5 288 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 TMEM185AQ8NFB2 350 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 LILRB4Q8NHJ6 448 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 MARCH1Q8TCQ1 289 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 CASTOR1Q8WTX7 329 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 MITD1Q8WV92 249 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 ELMOD3Q96FG2 381 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 SYT3Q9BQG1 590 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 BCL2L14Q9BZR8 327 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 MRPL18Q9H0U6 180 aaKnown RBP5.96□□□□□ -1.46
USP39-219ENST00000496047 AK3Q9UIJ7 227 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 ANXA10Q9UJ72 324 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 ELF5Q9UKW6 265 aaPredicted RBP5.96□□□□□ -1.46
USP39-219ENST00000496047 VSIG4Q9Y279 399 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 KCNIP3Q9Y2W7 256 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 STARD10Q9Y365 291 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 SPEF1Q9Y4P9 236 aa5.96□□□□□ -1.46
USP39-219ENST00000496047 HECTD1Q9ULT8 2610 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 IGKV1-27A0A075B6S5 117 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 TEX13DA0A0J9YY54 714 aaPredicted RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 MBD3L4A6NDZ8 208 aaPredicted RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 MBD3L3A6NE82 208 aaPredicted RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 MBD3L5A6NJ08 208 aaPredicted RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 CEACAM18A8MTB9 384 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 J3QT63 122 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 GEMIN2O14893 280 aaKnown RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 SMPD2O60906 423 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 NOS1APO75052 506 aaPredicted RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 LYZL6O75951 148 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 IFNA2P01563 188 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 GLAP06280 429 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 CTSDP07339 412 aaPredicted RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 FCGR3AP08637 254 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 C1QTNF9P0C862 333 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 CCL2P13500 99 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 RPA2P15927 270 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 CBR1P16152 277 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 ZNF14P17017 642 aaPredicted RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 PRKACAP17612 351 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 HLA-GP17693 338 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 COX5AP20674 150 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 ZBTB25P24278 435 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 S100A11P31949 105 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 HTR2BP41595 481 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 NPY4RP50391 375 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 AP2S1P53680 142 aaPredicted RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 SEC61A1P61619 476 aaKnown RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 SNRPD2P62316 118 aaKnown RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 UBA52P62987 128 aaKnown RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 SRPXP78539 464 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 IL24Q13007 206 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 SRSF6Q13247 344 aaKnown RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 IKZF1Q13422 519 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 PPP1R1AQ13522 171 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 OPCMLQ14982 345 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 SRSF7Q16629 238 aaKnown RBP eCLIP5.95□□□□□ -1.46
USP39-219ENST00000496047 C1orf185Q5T7R7 199 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 SLC22A25Q6T423 547 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 SEZ6L2Q6UXD5 910 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 Q6ZS92 163 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 KCTD9Q7L273 389 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 MOB1BQ7L9L4 216 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 SSX8Q7RTT4 187 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 C1QL2Q7Z5L3 287 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 KRTAP1-3Q8IUG1 177 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 FAM185AQ8N0U4 392 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 SPERTQ8NA61 448 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 INO80EQ8NBZ0 244 aaPredicted RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 OR10AD1Q8NGE0 317 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 OR5M9Q8NGP3 310 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 OR1J1Q8NGS3 322 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 MBD3L2Q8NHZ7 208 aaPredicted RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 SLAMF9Q96A28 289 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 BOD1Q96IK1 185 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 RHOVQ96L33 236 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 ZNF2Q9BSG1 426 aaPredicted RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 ADAT1Q9BUB4 502 aaKnown RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 METTL8Q9H825 291 aaKnown RBP5.95□□□□□ -1.46
USP39-219ENST00000496047 RAB18Q9NP72 206 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 CA10Q9NS85 328 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 ZFP57Q9NU63 452 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 GPR132Q9UNW8 380 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 CSAG2Q9Y5P2 127 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 SESN1Q9Y6P5 492 aa5.95□□□□□ -1.46
USP39-219ENST00000496047 IGF2RP11717 2491 aa5.94□□□□□ -1.46
USP39-219ENST00000496047 SMG1Q96Q15 3661 aaKnown RBP5.94□□□□□ -1.46
USP39-219ENST00000496047 SPTA1P02549 2419 aa5.94□□□□□ -1.46
USP39-219ENST00000496047 SCO2A0A1W2PP80 73 aa5.94□□□□□ -1.46
USP39-219ENST00000496047 WIPF3A6NGB9 483 aa5.94□□□□□ -1.46
USP39-219ENST00000496047 OR2AT4A6NND4 320 aa5.94□□□□□ -1.46
USP39-219ENST00000496047 IQCF6A8MYZ5 107 aa5.94□□□□□ -1.46
USP39-219ENST00000496047 TM4SF5O14894 197 aa5.94□□□□□ -1.46
USP39-219ENST00000496047 ARPC5O15511 151 aa5.94□□□□□ -1.46
USP39-219ENST00000496047 TIMM8AO60220 97 aaPredicted RBP5.94□□□□□ -1.46
USP39-219ENST00000496047 OR2F2O95006 317 aa5.94□□□□□ -1.46
USP39-219ENST00000496047 CD8AP01732 235 aa5.94□□□□□ -1.46
USP39-219ENST00000496047 ZNF728P0DKX0 622 aa5.94□□□□□ -1.46
USP39-219ENST00000496047 OR5H8P0DN80 308 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms