RNA–Protein interactions for RNA: ENST00000495748.5

PTPRK-214, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 746 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-214ENST00000495748 TBX5Q99593 518 aa6.2□□□□□ -1.42
PTPRK-214ENST00000495748 OCSTAMPQ9BR26 566 aa6.2□□□□□ -1.42
PTPRK-214ENST00000495748 OSBPL10Q9BXB5 764 aa6.2□□□□□ -1.42
PTPRK-214ENST00000495748 EXOSC4Q9NPD3 245 aaKnown RBP6.2□□□□□ -1.42
PTPRK-214ENST00000495748 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.2□□□□□ -1.423e-6■■■■■ 36.9
PTPRK-214ENST00000495748 PCDHB16Q9NRJ7 776 aa6.2□□□□□ -1.42
PTPRK-214ENST00000495748 AURKAIP1Q9NWT8 199 aaPredicted RBP6.2□□□□□ -1.42
PTPRK-214ENST00000495748 TSSC4Q9Y5U2 329 aaPredicted RBP6.2□□□□□ -1.42
PTPRK-214ENST00000495748 A0A1W2PQL4 384 aaPredicted RBP6.19□□□□□ -1.42
PTPRK-214ENST00000495748 TMEM82A0PJX8 343 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 E9PQ18 207 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 MAGEB4O15481 346 aaPredicted RBP6.19□□□□□ -1.42
PTPRK-214ENST00000495748 OR2F2O95006 317 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 ATF1P18846 271 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 RASSF2P50749 326 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 FOXB2Q5VYV0 432 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 KDM4DQ6B0I6 523 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 BCDIN3DQ7Z5W3 292 aaKnown RBP6.19□□□□□ -1.42
PTPRK-214ENST00000495748 CHST4Q8NCG5 386 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 OR4P4Q8NGL7 312 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 TRUB1Q8WWH5 349 aaKnown RBP6.19□□□□□ -1.42
PTPRK-214ENST00000495748 CORO2AQ92828 525 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 CPNE2Q96FN4 548 aaPredicted RBP6.19□□□□□ -1.42
PTPRK-214ENST00000495748 SLC25A33Q9BSK2 321 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 MCRIP2Q9BUT9 160 aaKnown RBP6.19□□□□□ -1.42
PTPRK-214ENST00000495748 CHST6Q9GZX3 395 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 GABARAPL1Q9H0R8 117 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 HMG20AQ9NP66 347 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 RBFOX1Q9NWB1 397 aaKnown RBP6.19□□□□□ -1.42
PTPRK-214ENST00000495748 OR6C3Q9NZP0 311 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 GNG8Q9UK08 70 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 AMMECR1Q9Y4X0 333 aaPredicted RBP6.19□□□□□ -1.42
PTPRK-214ENST00000495748 ORC6Q9Y5N6 252 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 DSCAML1Q8TD84 2053 aa6.19□□□□□ -1.42
PTPRK-214ENST00000495748 IGKV1-27A0A075B6S5 117 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 A0A1W2PRX2 142 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 ZNF729A6NN14 1252 aaPredicted RBP6.18□□□□□ -1.42
PTPRK-214ENST00000495748 ADARB2-AS1A8MUL3 147 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 F8VVB4 439 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 F8VWA3 439 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 MITFO75030 526 aaPredicted RBP6.18□□□□□ -1.42
PTPRK-214ENST00000495748 ENTPD6O75354 484 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 MPIG6BO95866 241 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 OR2H2O95918 312 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 IGHA1P01876 353 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 ISG15P05161 165 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 CSN2P05814 226 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 HTR1AP08908 422 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 FAM106CPP0CH98 169 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 DBTP11182 482 aaKnown RBP6.18□□□□□ -1.42
PTPRK-214ENST00000495748 ZNF44P15621 663 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 IGLL1P15814 213 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 BCL3P20749 454 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 CDK2P24941 298 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 CD34P28906 385 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 SLC6A1P30531 599 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 PTGFRP43088 359 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 OR3A1P47881 315 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 PDZK1IP1Q13113 114 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 ABCA11PQ4W5N1 156 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 KIAA2026Q5HYC2 2103 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 KHDC1LQ5JSQ8 128 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 VAX1Q5SQQ9 334 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 LDLRAD2Q5SZI1 272 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 HIST2H2BDQ6DRA6 164 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 CCDC121Q6ZUS5 278 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 SSX6Q7RTT6 188 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 TCF23Q7RTU1 214 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 SAXO1Q8IYX7 474 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 TPRX1Q8N7U7 411 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 ZNF565Q8N9K5 539 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 OR52N4Q8NGI2 321 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 OPALINQ96PE5 141 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 RBM14Q96PK6 669 aaKnown RBP6.18□□□□□ -1.42
PTPRK-214ENST00000495748 KRTAP3-3Q9BYR6 98 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 KRTAP3-2Q9BYR7 98 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 COMMD4Q9H0A8 199 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 HHLA2Q9UM44 414 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 GSTK1Q9Y2Q3 226 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 AP4S1Q9Y587 144 aa6.18□□□□□ -1.42
PTPRK-214ENST00000495748 ODAMA1E959 279 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 MEX3AA1L020 520 aaKnown RBP6.17□□□□□ -1.42
PTPRK-214ENST00000495748 H3BSH0 61 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 M0R129 80 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 SIRPB1O00241 398 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 PSPNO60542 156 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 ATP5HO75947 161 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 KDM4BO94953 1096 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 IGLV1-47P01700 117 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 MT-ND2P03891 347 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 LMO1P25800 156 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 DUSP1P28562 367 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 EPHA2P29317 976 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 NPBWR2P48146 333 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 CCR9P51686 369 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 SNU13P55769 128 aaKnown RBP6.17□□□□□ -1.42
PTPRK-214ENST00000495748 SLC35B1P78383 322 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 BNIP1Q12981 228 aa6.17□□□□□ -1.42
PTPRK-214ENST00000495748 MRPL28Q13084 256 aaKnown RBP6.17□□□□□ -1.42
PTPRK-214ENST00000495748 HLA-DRB5Q30154 266 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 291.7 ms