RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 ZNF260Q3ZCT1 412 aa10.53□□□□□ -0.72
COL1A1-209ENST00000495677 HSP90B2PQ58FF3 399 aa10.53□□□□□ -0.72
COL1A1-209ENST00000495677 PRAMEF5Q5TYX0 476 aa10.53□□□□□ -0.72
COL1A1-209ENST00000495677 MEPCEQ7L2J0 689 aaKnown RBP10.53□□□□□ -0.72
COL1A1-209ENST00000495677 CPOQ8IVL8 374 aa10.53□□□□□ -0.72
COL1A1-209ENST00000495677 IQCF1Q8N6M8 205 aa10.53□□□□□ -0.72
COL1A1-209ENST00000495677 CADM1Q9BY67 442 aaKnown RBP10.53□□□□□ -0.72
COL1A1-209ENST00000495677 CCDC134Q9H6E4 229 aa10.53□□□□□ -0.72
COL1A1-209ENST00000495677 LINC00527Q9UJ94 153 aa10.53□□□□□ -0.72
COL1A1-209ENST00000495677 TRBV2A0A0J9YWF9 115 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 FAM230AA0A1W2PPH8 454 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 PRR32B1ATL7 298 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 H3BN98 237 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 AP4M1O00189 453 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 RPLP1P05386 114 aaKnown RBP10.52□□□□□ -0.73
COL1A1-209ENST00000495677 CCL1P22362 96 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 GDNFP39905 211 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 OR3A1P47881 315 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 ACTR3P61158 418 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 CBX1P83916 185 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 CDK5Q00535 292 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 FOXE3Q13461 319 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 EBI3Q14213 229 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 KPNB1Q14974 876 aaKnown RBP10.52□□□□□ -0.73
COL1A1-209ENST00000495677 UBE2V2Q15819 145 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 SPATS1Q496A3 300 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 CXorf66Q5JRM2 361 aaPredicted RBP10.52□□□□□ -0.73
COL1A1-209ENST00000495677 SPIN3Q5JUX0 258 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 OR2T5Q6IEZ7 315 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 OR4D6Q8NGJ1 314 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 OR2T29Q8NH02 315 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 OR9G1Q8NH87 305 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 EMG1Q92979 244 aaKnown RBP10.52□□□□□ -0.73
COL1A1-209ENST00000495677 SLAMF9Q96A28 289 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 RPEQ96AT9 228 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 HYDINQ4G0P3 5121 aa10.52□□□□□ -0.73
COL1A1-209ENST00000495677 A0A1W2PPI3 338 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 A6NIN4 97 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 ZNF729A6NN14 1252 aaPredicted RBP10.51□□□□□ -0.73
COL1A1-209ENST00000495677 LOC110117498-PIK3R3F6TDL0 507 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 CSN2P05814 226 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 TMEM11P17152 192 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 VEGFCP49767 419 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 MFGE8Q08431 387 aaPredicted RBP10.51□□□□□ -0.73
COL1A1-209ENST00000495677 GPR50Q13585 617 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 DEFB136Q30KP8 78 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 SLC25A26Q70HW3 274 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 PGAM4Q8N0Y7 254 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 OR8H3Q8N146 312 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 FAM58AQ8N1B3 248 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 TRMT10AQ8TBZ6 339 aaKnown RBP10.51□□□□□ -0.73
COL1A1-209ENST00000495677 C4orf3Q8WVX3 66 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 TM2D3Q9BRN9 247 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 MAGIXQ9H6Y5 334 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 REEP1Q9H902 201 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 EDA2RQ9HAV5 297 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 OR52A1Q9UKL2 312 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 SAMHD1Q9Y3Z3 626 aaKnown RBP10.51□□□□□ -0.73
COL1A1-209ENST00000495677 AMMECR1Q9Y4X0 333 aaPredicted RBP10.51□□□□□ -0.73
COL1A1-209ENST00000495677 R4GMQ9 66 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 U3KQV3 271 aa10.51□□□□□ -0.73
COL1A1-209ENST00000495677 LINC01548A6NM66 108 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 ENTPD6O75354 484 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 FRMD6-AS1P0C7T7 363 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 CGB3P0DN86 165 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 CGB7P0DN87 165 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 RAB7AP51149 207 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 GINS1Q14691 196 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 C17orf58Q2M2W7 97 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 ZNF429Q86V71 674 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 TGIF2LXQ8IUE1 241 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 CCDC54Q8NEL0 328 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 DNAAF1Q8NEP3 725 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 BBS1Q8NFJ9 593 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 OR10G2Q8NGC3 310 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 OR56B4Q8NH76 319 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 TOMM40LQ969M1 308 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 C10orf35Q96D05 121 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 HRASLS5Q96KN8 279 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 FEVQ99581 238 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 ABCG5Q9H222 651 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 IL36RNQ9UBH0 155 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 COPS3Q9UNS2 423 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 SNX5Q9Y5X3 404 aa10.5□□□□□ -0.73
COL1A1-209ENST00000495677 FAM172BPA6NC97 362 aa10.49□□□□□ -0.73
COL1A1-209ENST00000495677 J3QR06 171 aa10.49□□□□□ -0.73
COL1A1-209ENST00000495677 SH2D1BO14796 132 aa10.49□□□□□ -0.73
COL1A1-209ENST00000495677 GATBO75879 557 aaKnown RBP10.49□□□□□ -0.73
COL1A1-209ENST00000495677 IGHG4P01861 327 aa10.49□□□□□ -0.73
COL1A1-209ENST00000495677 DUSP1P28562 367 aa10.49□□□□□ -0.73
COL1A1-209ENST00000495677 PTGFRP43088 359 aa10.49□□□□□ -0.73
COL1A1-209ENST00000495677 GLIPR1P48060 266 aa10.49□□□□□ -0.73
COL1A1-209ENST00000495677 NPBWR2P48146 333 aa10.49□□□□□ -0.73
COL1A1-209ENST00000495677 RPS7P62081 194 aaKnown RBP10.49□□□□□ -0.73
COL1A1-209ENST00000495677 AESQ08117 197 aa10.49□□□□□ -0.73
COL1A1-209ENST00000495677 APOFQ13790 326 aa10.49□□□□□ -0.73
COL1A1-209ENST00000495677 HES1Q14469 280 aa10.49□□□□□ -0.73
COL1A1-209ENST00000495677 FAM27D1Q5T7N8 215 aa10.49□□□□□ -0.73
COL1A1-209ENST00000495677 ZFAND6Q6FIF0 208 aa10.49□□□□□ -0.73
COL1A1-209ENST00000495677 FAM71E2Q8N5Q1 922 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms