RNA–Protein interactions for RNA: ENST00000495190.1

VPS8-226, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 756 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-226ENST00000495190 SBSNQ6UWP8 590 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 ALKAL2Q6UX46 152 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 LRRN1Q6UXK5 716 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 TMIGD1Q6UXZ0 262 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 ANGPTL5Q86XS5 388 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 CCDC71LQ8N9Z2 235 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 OR4K2Q8NGD2 314 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 RNASE11Q8TAA1 199 aaKnown RBP3.88□□□□□ -1.79
VPS8-226ENST00000495190 PHOSPHO2Q8TCD6 241 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 SMIM4Q8WVI0 70 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 TSSK3Q96PN8 268 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 COPS8Q99627 209 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 MED10Q9BTT4 135 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 C1QTNF6Q9BXI9 259 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 TM6SF2Q9BZW4 377 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 ARL6Q9H0F7 186 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 NXF5Q9H1B4 397 aaKnown RBP3.88□□□□□ -1.79
VPS8-226ENST00000495190 C20orf85Q9H1P6 137 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 SMCO4Q9NRQ5 59 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 INPP5EQ9NRR6 644 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 ZNF629Q9UEG4 869 aaPredicted RBP3.88□□□□□ -1.79
VPS8-226ENST00000495190 SLC22A7Q9Y694 548 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 TSC2P49815 1807 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 DOCK1Q14185 1865 aa3.88□□□□□ -1.79
VPS8-226ENST00000495190 A0A0G2JMZ2 1700 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 LRRC37A2A6NM11 1700 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 RFPL4AA6NLU0 287 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 RFPL4AL1F8VTS6 287 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 GABARAPH6UMI1 98 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 GFYI3L273 518 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 SCAMP2O15127 329 aaKnown RBP3.87□□□□□ -1.79
VPS8-226ENST00000495190 SLC31A2O15432 143 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 FGF16O43320 207 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 RNF13O43567 381 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 EIF4E2O60573 245 aaKnown RBP3.87□□□□□ -1.79
VPS8-226ENST00000495190 NIPSNAP2O75323 286 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 MMP23AO75900 390 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 NDUFB6O95139 128 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 ACTL6AO96019 429 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 PDYNP01213 254 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 IGLV1-47P01700 117 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 MT-ND4LP03901 98 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 SLC25A4P12235 298 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 POU2F1P14859 743 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 ABOP16442 354 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 HNF1AP20823 631 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 MMP11P24347 488 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 FAUP35544 74 aaKnown RBP3.87□□□□□ -1.79
VPS8-226ENST00000495190 ATP5C1P36542 298 aaKnown RBP3.87□□□□□ -1.79
VPS8-226ENST00000495190 GPX4P36969 197 aaPredicted RBP3.87□□□□□ -1.79
VPS8-226ENST00000495190 KCNJ3P48549 501 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 RAB5CP51148 216 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 TAS2R60P59551 318 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 RAB2AP61019 212 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 CDK6Q00534 326 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 SLC10A7Q0GE19 358 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 GINS1Q14691 196 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 MAPK14Q16539 360 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 TP53I3Q53FA7 332 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 FBXO48Q5FWF7 155 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 TMEM255AQ5JRV8 349 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 CTSL3PQ5NE16 218 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 OR2G6Q5TZ20 316 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 REEP3Q6NUK4 255 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 C1orf94Q6P1W5 598 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 TAC4Q86UU9 113 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 PUSL1Q8N0Z8 303 aaKnown RBP3.87□□□□□ -1.79
VPS8-226ENST00000495190 KCNRGQ8N5I3 272 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 TMEM252Q8N6L7 170 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 STXBP6Q8NFX7 210 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 OR11G2Q8NGC1 345 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 OR1J4Q8NGS1 313 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 OR13C4Q8NGS5 318 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 THEM6Q8WUY1 208 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 TFGQ92734 400 aaPredicted RBP3.87□□□□□ -1.79
VPS8-226ENST00000495190 THRSPQ92748 146 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 MALSU1Q96EH3 234 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 SMARCD1Q96GM5 515 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 CMSS1Q9BQ75 279 aaKnown RBP3.87□□□□□ -1.79
VPS8-226ENST00000495190 GINS4Q9BRT9 223 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 SLC35A5Q9BS91 424 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 NIPSNAP3BQ9BS92 247 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 MFFQ9GZY8 342 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 NOX3Q9HBY0 568 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 HRASLSQ9HDD0 168 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 MYOZ1Q9NP98 299 aaPredicted RBP3.87□□□□□ -1.79
VPS8-226ENST00000495190 SLC17A5Q9NRA2 495 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 CTPS2Q9NRF8 586 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 C14orf105Q9NVL8 296 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 TVP23BQ9NYZ1 205 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 VPS29Q9UBQ0 182 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 OPN4Q9UHM6 478 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 AK6Q9Y3D8 172 aaKnown RBP3.87□□□□□ -1.79
VPS8-226ENST00000495190 SNX10Q9Y5X0 201 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 ARL5AQ9Y689 179 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 BRCA1P38398 1863 aaKnown RBP3.87□□□□□ -1.79
VPS8-226ENST00000495190 GBF1Q92538 1859 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 LTBP4Q8N2S1 1624 aa3.87□□□□□ -1.79
VPS8-226ENST00000495190 ZNF638Q14966 1978 aaKnown RBP3.86□□□□□ -1.79
VPS8-226ENST00000495190 KANTRA0A1W2PQU2 76 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms