RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 PMVKQ15126 192 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 BATFQ16520 125 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 ADAMTSL4-AS1Q5T5F5 129 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 LINC00173Q6ZV60 143 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 C1orf158Q8N1D5 194 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 OR4S2Q8NH73 311 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 RPL36ALQ969Q0 106 aaKnown RBP5.22□□□□□ -1.57
SNX13-210ENST00000494402 OR52E6Q96RD3 313 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 EBF4Q9BQW3 602 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 POLR2J2Q9GZM3 115 aaKnown RBP5.22□□□□□ -1.57
SNX13-210ENST00000494402 SLC25A31Q9H0C2 315 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 POLR2J3Q9H1A7 115 aaKnown RBP5.22□□□□□ -1.57
SNX13-210ENST00000494402 SPANXA1Q9NS26 97 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 PCYOX1Q9UHG3 505 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 SLC35A3Q9Y2D2 325 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 UTP11Q9Y3A2 253 aaKnown RBP5.22□□□□□ -1.57
SNX13-210ENST00000494402 TMEM56-RWDD3S4R434 201 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 MYH15Q9Y2K3 1946 aa5.22□□□□□ -1.57
SNX13-210ENST00000494402 ARHGEF10O15013 1369 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 GALR3O60755 368 aaPredicted RBP5.21□□□□□ -1.58
SNX13-210ENST00000494402 SPAG7O75391 227 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 SERPINA7P05543 415 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 C1GALT1C1LP0DN25 315 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 IGHV3-43DP0DP04 118 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 ZNF708P17019 499 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 CTRLP40313 264 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 NCBP2P52298 156 aaKnown RBP eCLIP5.21□□□□□ -1.58
SNX13-210ENST00000494402 CCL23P55773 120 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 HERPUD1Q15011 391 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 PRR4Q16378 134 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 DEFB115Q30KQ5 88 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 COA6Q5JTJ3 125 aaKnown RBP5.21□□□□□ -1.58
SNX13-210ENST00000494402 N4BP2L1Q5TBK1 243 aaPredicted RBP5.21□□□□□ -1.58
SNX13-210ENST00000494402 TSPO2Q5TGU0 170 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 TEX36Q5VZQ5 186 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 TMEM236Q5W0B7 351 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 ELP2Q6IA86 826 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 NEGR1Q7Z3B1 354 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 CLVS1Q8IUQ0 354 aaPredicted RBP5.21□□□□□ -1.58
SNX13-210ENST00000494402 C11orf40Q8WZ69 217 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 LZICQ8WZA0 190 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 BORCS7Q96B45 105 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 SYT15Q9BQS2 421 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 CHCHD5Q9BSY4 110 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 SFXN3Q9BWM7 321 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 KRTAP9-3Q9BYQ3 159 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 OR51I2Q9H344 312 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 IDI2-AS1Q9NZ38 188 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 GLS2Q9UI32 602 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 CLUHO75153 1309 aa5.21□□□□□ -1.58
SNX13-210ENST00000494402 IGHV1-69DA0A0B4J2H0 117 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 FAM172BPA6NC97 362 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 KPNA4O00629 521 aaPredicted RBP5.2□□□□□ -1.58
SNX13-210ENST00000494402 YIF1AO95070 293 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 EPPINO95925 133 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 TRBV12-3P01733 135 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 IGHV3-48P01763 117 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 REG1AP05451 166 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 FAM228BP0C875 321 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 RNF224P0DH78 156 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 SULT1A3P0DMM9 295 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 SULT1A4P0DMN0 295 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 SNHG28P0DPA3 235 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 CXCL2P19875 107 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 CD34P28906 385 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 DDTP30046 118 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 PRSS3P35030 304 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 ZNF138P52744 262 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 RIPPLY3P57055 190 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 ARFRP1Q13795 201 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 KLF9Q13886 244 aaPredicted RBP5.2□□□□□ -1.58
SNX13-210ENST00000494402 C16orf72Q14CZ0 275 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 GSG1Q2KHT4 349 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 FAM78BQ5VT40 261 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 GRINAQ7Z429 371 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 ZCCHC24Q8N2G6 241 aaKnown RBP5.2□□□□□ -1.58
SNX13-210ENST00000494402 ZNF561Q8N587 486 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 NPRL2Q8WTW4 380 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 SKA2Q8WVK7 121 aaPredicted RBP5.2□□□□□ -1.58
SNX13-210ENST00000494402 TMEM159Q96B96 161 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 SMIM8Q96KF7 97 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 ZNF184Q99676 751 aaPredicted RBP5.2□□□□□ -1.58
SNX13-210ENST00000494402 GINS3Q9BRX5 216 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 ALX4Q9H161 411 aaPredicted RBP5.2□□□□□ -1.58
SNX13-210ENST00000494402 ZSCAN16Q9H4T2 348 aaPredicted RBP5.2□□□□□ -1.58
SNX13-210ENST00000494402 C6orf106Q9H6K1 298 aaPredicted RBP5.2□□□□□ -1.58
SNX13-210ENST00000494402 ZDHHC11Q9H8X9 412 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 SLC25A22Q9H936 323 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 FAM49BQ9NUQ9 324 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 RBFOX1Q9NWB1 397 aaKnown RBP5.2□□□□□ -1.58
SNX13-210ENST00000494402 FLVCR1Q9Y5Y0 555 aa5.2□□□□□ -1.58
SNX13-210ENST00000494402 NPHP4O75161 1426 aaPredicted RBP5.2□□□□□ -1.58
SNX13-210ENST00000494402 CIB4A0PJX0 185 aa5.19□□□□□ -1.58
SNX13-210ENST00000494402 PMS2P5A8MQ11 134 aa5.19□□□□□ -1.58
SNX13-210ENST00000494402 BHLHE40O14503 412 aa5.19□□□□□ -1.58
SNX13-210ENST00000494402 PI15O43692 258 aa5.19□□□□□ -1.58
SNX13-210ENST00000494402 EDIL3O43854 480 aa5.19□□□□□ -1.58
SNX13-210ENST00000494402 DHRS3O75911 302 aa5.19□□□□□ -1.58
SNX13-210ENST00000494402 OR4A8P0C604 315 aa5.19□□□□□ -1.58
SNX13-210ENST00000494402 ZSCAN5DPP0CG00 497 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms